Protein–RNA interactions for Protein: Q8IV63

VRK3, Inactive serine/threonine-protein kinase VRK3, humanhuman

Predictions only

Length 474 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3Q8IV63 SLC22A20-204ENST00000530038 1673 ntBASIC16.57■□□□□ 0.24
VRK3Q8IV63 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
VRK3Q8IV63 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
VRK3Q8IV63 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC16.57■□□□□ 0.24
VRK3Q8IV63 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC16.57■□□□□ 0.24
VRK3Q8IV63 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC16.57■□□□□ 0.24
VRK3Q8IV63 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC16.57■□□□□ 0.24
VRK3Q8IV63 PMS2P1-201ENST00000431037 1228 ntBASIC16.57■□□□□ 0.24
VRK3Q8IV63 PRSS29P-201ENST00000440800 595 ntBASIC16.57■□□□□ 0.24
VRK3Q8IV63 VN2R19P-201ENST00000442399 1052 ntBASIC16.57■□□□□ 0.24
VRK3Q8IV63 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
VRK3Q8IV63 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC16.57■□□□□ 0.24
VRK3Q8IV63 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC16.57■□□□□ 0.24
VRK3Q8IV63 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC16.57■□□□□ 0.24
VRK3Q8IV63 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC16.57■□□□□ 0.24
VRK3Q8IV63 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC16.57■□□□□ 0.24
VRK3Q8IV63 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC16.57■□□□□ 0.24
VRK3Q8IV63 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC16.57■□□□□ 0.24
VRK3Q8IV63 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
VRK3Q8IV63 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
VRK3Q8IV63 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC16.57■□□□□ 0.24
VRK3Q8IV63 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
VRK3Q8IV63 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
VRK3Q8IV63 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC16.57■□□□□ 0.24
VRK3Q8IV63 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC16.57■□□□□ 0.24
VRK3Q8IV63 AL603756.1-201ENST00000606511 2163 ntBASIC16.57■□□□□ 0.24
VRK3Q8IV63 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
VRK3Q8IV63 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC16.57■□□□□ 0.24
VRK3Q8IV63 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC16.57■□□□□ 0.24
VRK3Q8IV63 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC16.57■□□□□ 0.24
VRK3Q8IV63 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC16.57■□□□□ 0.24
VRK3Q8IV63 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC16.57■□□□□ 0.24
VRK3Q8IV63 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
VRK3Q8IV63 PC-204ENST00000524491 1714 ntTSL 2 BASIC16.56■□□□□ 0.24
VRK3Q8IV63 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
VRK3Q8IV63 AC099398.1-201ENST00000567919 2776 ntBASIC16.56■□□□□ 0.24
VRK3Q8IV63 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC16.56■□□□□ 0.24
VRK3Q8IV63 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
VRK3Q8IV63 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
VRK3Q8IV63 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
VRK3Q8IV63 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC16.56■□□□□ 0.24
VRK3Q8IV63 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
VRK3Q8IV63 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
VRK3Q8IV63 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC16.56■□□□□ 0.24
VRK3Q8IV63 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
VRK3Q8IV63 TEX30-205ENST00000376029 959 ntTSL 2 BASIC16.56■□□□□ 0.24
VRK3Q8IV63 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
VRK3Q8IV63 HCG4B-203ENST00000450128 991 ntBASIC16.56■□□□□ 0.24
VRK3Q8IV63 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC16.56■□□□□ 0.24
VRK3Q8IV63 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC16.56■□□□□ 0.24
VRK3Q8IV63 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC16.56■□□□□ 0.24
VRK3Q8IV63 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC16.56■□□□□ 0.24
VRK3Q8IV63 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
VRK3Q8IV63 TCAP-202ENST00000578283 583 ntTSL 5 BASIC16.56■□□□□ 0.24
VRK3Q8IV63 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC16.56■□□□□ 0.24
VRK3Q8IV63 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
VRK3Q8IV63 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
VRK3Q8IV63 ACTL9-202ENST00000612068 1252 ntBASIC16.56■□□□□ 0.24
VRK3Q8IV63 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
VRK3Q8IV63 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
VRK3Q8IV63 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
VRK3Q8IV63 AL391256.1-201ENST00000443260 1855 ntBASIC16.56■□□□□ 0.24
VRK3Q8IV63 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
VRK3Q8IV63 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC16.56■□□□□ 0.24
VRK3Q8IV63 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
VRK3Q8IV63 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC16.55■□□□□ 0.24
VRK3Q8IV63 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC16.55■□□□□ 0.24
VRK3Q8IV63 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC16.55■□□□□ 0.24
VRK3Q8IV63 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
VRK3Q8IV63 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC16.55■□□□□ 0.24
VRK3Q8IV63 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC16.55■□□□□ 0.24
VRK3Q8IV63 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC16.55■□□□□ 0.24
VRK3Q8IV63 AC129492.6-201ENST00000611383 1305 ntBASIC16.55■□□□□ 0.24
VRK3Q8IV63 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC16.55■□□□□ 0.24
VRK3Q8IV63 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC16.55■□□□□ 0.24
VRK3Q8IV63 AC007967.2-201ENST00000432613 625 ntBASIC16.55■□□□□ 0.24
VRK3Q8IV63 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC16.55■□□□□ 0.24
VRK3Q8IV63 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC16.55■□□□□ 0.24
VRK3Q8IV63 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
VRK3Q8IV63 MPDU1-223ENST00000582151 728 ntBASIC16.55■□□□□ 0.24
VRK3Q8IV63 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
VRK3Q8IV63 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
VRK3Q8IV63 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC16.55■□□□□ 0.24
VRK3Q8IV63 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
VRK3Q8IV63 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
VRK3Q8IV63 UBALD1-205ENST00000590891 2641 ntBASIC16.55■□□□□ 0.24
VRK3Q8IV63 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC16.55■□□□□ 0.24
VRK3Q8IV63 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
VRK3Q8IV63 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC16.55■□□□□ 0.24
VRK3Q8IV63 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
VRK3Q8IV63 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC16.55■□□□□ 0.24
VRK3Q8IV63 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
VRK3Q8IV63 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
VRK3Q8IV63 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC16.54■□□□□ 0.24
VRK3Q8IV63 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
VRK3Q8IV63 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
VRK3Q8IV63 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
VRK3Q8IV63 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC16.54■□□□□ 0.24
VRK3Q8IV63 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
VRK3Q8IV63 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms