Protein–RNA interactions for Protein: Q8IV50

LYSMD2, LysM and putative peptidoglycan-binding domain-containing protein 2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2Q8IV50 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
LYSMD2Q8IV50 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
LYSMD2Q8IV50 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
LYSMD2Q8IV50 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
LYSMD2Q8IV50 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC14.94□□□□□ -0.02
LYSMD2Q8IV50 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
LYSMD2Q8IV50 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
LYSMD2Q8IV50 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
LYSMD2Q8IV50 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
LYSMD2Q8IV50 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LYSMD2Q8IV50 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LYSMD2Q8IV50 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
LYSMD2Q8IV50 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
LYSMD2Q8IV50 AL645728.1-201ENST00000366221 2101 ntBASIC14.93□□□□□ -0.02
LYSMD2Q8IV50 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
LYSMD2Q8IV50 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC14.93□□□□□ -0.02
LYSMD2Q8IV50 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LYSMD2Q8IV50 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC14.93□□□□□ -0.02
LYSMD2Q8IV50 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
LYSMD2Q8IV50 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC14.93□□□□□ -0.02
LYSMD2Q8IV50 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC14.93□□□□□ -0.02
LYSMD2Q8IV50 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LYSMD2Q8IV50 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
LYSMD2Q8IV50 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LYSMD2Q8IV50 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
LYSMD2Q8IV50 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
LYSMD2Q8IV50 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LYSMD2Q8IV50 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC14.93□□□□□ -0.02
LYSMD2Q8IV50 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
LYSMD2Q8IV50 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LYSMD2Q8IV50 AC128676.1-201ENST00000454392 318 ntBASIC14.93□□□□□ -0.02
LYSMD2Q8IV50 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC14.93□□□□□ -0.02
LYSMD2Q8IV50 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC14.93□□□□□ -0.02
LYSMD2Q8IV50 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC14.93□□□□□ -0.02
LYSMD2Q8IV50 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC14.93□□□□□ -0.02
LYSMD2Q8IV50 TK1-204ENST00000590430 683 ntTSL 3 BASIC14.93□□□□□ -0.02
LYSMD2Q8IV50 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LYSMD2Q8IV50 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
LYSMD2Q8IV50 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LYSMD2Q8IV50 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
LYSMD2Q8IV50 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LYSMD2Q8IV50 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC14.93□□□□□ -0.02
LYSMD2Q8IV50 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC14.93□□□□□ -0.02
LYSMD2Q8IV50 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC14.93□□□□□ -0.02
LYSMD2Q8IV50 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LYSMD2Q8IV50 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LYSMD2Q8IV50 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
LYSMD2Q8IV50 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
LYSMD2Q8IV50 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LYSMD2Q8IV50 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC14.93□□□□□ -0.02
LYSMD2Q8IV50 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
LYSMD2Q8IV50 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
LYSMD2Q8IV50 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LYSMD2Q8IV50 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
LYSMD2Q8IV50 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LYSMD2Q8IV50 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
LYSMD2Q8IV50 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
LYSMD2Q8IV50 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LYSMD2Q8IV50 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC14.92□□□□□ -0.02
LYSMD2Q8IV50 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
LYSMD2Q8IV50 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
LYSMD2Q8IV50 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LYSMD2Q8IV50 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LYSMD2Q8IV50 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC14.92□□□□□ -0.02
LYSMD2Q8IV50 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
LYSMD2Q8IV50 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
LYSMD2Q8IV50 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
LYSMD2Q8IV50 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC14.92□□□□□ -0.02
LYSMD2Q8IV50 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
LYSMD2Q8IV50 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
LYSMD2Q8IV50 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LYSMD2Q8IV50 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC14.92□□□□□ -0.02
LYSMD2Q8IV50 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC14.92□□□□□ -0.02
LYSMD2Q8IV50 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
LYSMD2Q8IV50 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC14.92□□□□□ -0.02
LYSMD2Q8IV50 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC14.92□□□□□ -0.02
LYSMD2Q8IV50 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC14.92□□□□□ -0.02
LYSMD2Q8IV50 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC14.92□□□□□ -0.02
LYSMD2Q8IV50 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC14.92□□□□□ -0.02
LYSMD2Q8IV50 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
LYSMD2Q8IV50 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
LYSMD2Q8IV50 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
LYSMD2Q8IV50 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LYSMD2Q8IV50 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LYSMD2Q8IV50 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
LYSMD2Q8IV50 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LYSMD2Q8IV50 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
LYSMD2Q8IV50 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC14.92□□□□□ -0.02
LYSMD2Q8IV50 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
LYSMD2Q8IV50 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LYSMD2Q8IV50 AC005089.1-201ENST00000619486 2241 ntBASIC14.92□□□□□ -0.02
LYSMD2Q8IV50 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
LYSMD2Q8IV50 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC14.92□□□□□ -0.02
LYSMD2Q8IV50 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC14.92□□□□□ -0.02
LYSMD2Q8IV50 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
LYSMD2Q8IV50 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
LYSMD2Q8IV50 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
LYSMD2Q8IV50 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC14.91□□□□□ -0.02
LYSMD2Q8IV50 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
LYSMD2Q8IV50 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms