Protein–RNA interactions for Protein: Q7Z407

CSMD3, CUB and sushi domain-containing protein 3, humanhuman

Predictions only

Length 3,707 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3Q7Z407 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC11.65□□□□□ -0.54
CSMD3Q7Z407 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
CSMD3Q7Z407 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
CSMD3Q7Z407 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
CSMD3Q7Z407 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
CSMD3Q7Z407 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
CSMD3Q7Z407 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
CSMD3Q7Z407 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
CSMD3Q7Z407 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
CSMD3Q7Z407 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC11.65□□□□□ -0.54
CSMD3Q7Z407 AC098850.1-201ENST00000419919 790 ntBASIC11.65□□□□□ -0.54
CSMD3Q7Z407 TTTY23B-201ENST00000442790 549 ntBASIC11.65□□□□□ -0.54
CSMD3Q7Z407 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC11.65□□□□□ -0.54
CSMD3Q7Z407 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
CSMD3Q7Z407 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC11.65□□□□□ -0.54
CSMD3Q7Z407 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
CSMD3Q7Z407 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
CSMD3Q7Z407 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
CSMD3Q7Z407 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
CSMD3Q7Z407 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
CSMD3Q7Z407 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC11.65□□□□□ -0.54
CSMD3Q7Z407 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
CSMD3Q7Z407 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC11.65□□□□□ -0.54
CSMD3Q7Z407 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC11.65□□□□□ -0.54
CSMD3Q7Z407 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC11.65□□□□□ -0.54
CSMD3Q7Z407 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
CSMD3Q7Z407 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC11.65□□□□□ -0.55
CSMD3Q7Z407 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC11.65□□□□□ -0.55
CSMD3Q7Z407 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC11.65□□□□□ -0.55
CSMD3Q7Z407 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC11.65□□□□□ -0.55
CSMD3Q7Z407 TPR-209ENST00000613151 2478 ntTSL 5 BASIC11.64□□□□□ -0.55
CSMD3Q7Z407 SPDYE19P-201ENST00000338590 713 ntBASIC11.64□□□□□ -0.55
CSMD3Q7Z407 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC11.64□□□□□ -0.55
CSMD3Q7Z407 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC11.64□□□□□ -0.55
CSMD3Q7Z407 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
CSMD3Q7Z407 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC11.64□□□□□ -0.55
CSMD3Q7Z407 USP32P1-208ENST00000506594 1164 ntBASIC11.64□□□□□ -0.55
CSMD3Q7Z407 RNA5SP423-201ENST00000517127 109 ntBASIC11.64□□□□□ -0.55
CSMD3Q7Z407 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC11.64□□□□□ -0.55
CSMD3Q7Z407 LITAF-210ENST00000571976 548 ntTSL 2 BASIC11.64□□□□□ -0.55
CSMD3Q7Z407 LITAF-214ENST00000574703 486 ntTSL 2 BASIC11.64□□□□□ -0.55
CSMD3Q7Z407 AL512343.1-201ENST00000605837 169 ntBASIC11.64□□□□□ -0.55
CSMD3Q7Z407 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
CSMD3Q7Z407 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC11.64□□□□□ -0.55
CSMD3Q7Z407 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC11.64□□□□□ -0.55
CSMD3Q7Z407 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
CSMD3Q7Z407 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
CSMD3Q7Z407 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
CSMD3Q7Z407 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
CSMD3Q7Z407 TNXA-203ENST00000507684 2038 ntBASIC11.64□□□□□ -0.55
CSMD3Q7Z407 AL133338.1-201ENST00000565695 1517 ntBASIC11.64□□□□□ -0.55
CSMD3Q7Z407 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC11.64□□□□□ -0.55
CSMD3Q7Z407 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC11.64□□□□□ -0.55
CSMD3Q7Z407 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC11.64□□□□□ -0.55
CSMD3Q7Z407 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC11.64□□□□□ -0.55
CSMD3Q7Z407 ZNF767P-206ENST00000513792 565 ntBASIC11.64□□□□□ -0.55
CSMD3Q7Z407 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC11.64□□□□□ -0.55
CSMD3Q7Z407 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
CSMD3Q7Z407 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
CSMD3Q7Z407 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC11.64□□□□□ -0.55
CSMD3Q7Z407 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
CSMD3Q7Z407 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
CSMD3Q7Z407 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
CSMD3Q7Z407 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
CSMD3Q7Z407 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
CSMD3Q7Z407 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC11.64□□□□□ -0.55
CSMD3Q7Z407 MFF-223ENST00000524634 647 ntTSL 2 BASIC11.64□□□□□ -0.55
CSMD3Q7Z407 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC11.64□□□□□ -0.55
CSMD3Q7Z407 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC11.64□□□□□ -0.55
CSMD3Q7Z407 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC11.64□□□□□ -0.55
CSMD3Q7Z407 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
CSMD3Q7Z407 AL133373.2-201ENST00000623187 2828 ntBASIC11.64□□□□□ -0.55
CSMD3Q7Z407 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
CSMD3Q7Z407 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC11.64□□□□□ -0.55
CSMD3Q7Z407 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
CSMD3Q7Z407 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
CSMD3Q7Z407 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
CSMD3Q7Z407 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
CSMD3Q7Z407 NME9-203ENST00000383180 2133 ntTSL 2 BASIC11.63□□□□□ -0.55
CSMD3Q7Z407 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC11.63□□□□□ -0.55
CSMD3Q7Z407 CD81-207ENST00000481687 890 ntTSL 2 BASIC11.63□□□□□ -0.55
CSMD3Q7Z407 AC108142.1-201ENST00000505389 286 ntTSL 3 BASIC11.63□□□□□ -0.55
CSMD3Q7Z407 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC11.63□□□□□ -0.55
CSMD3Q7Z407 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
CSMD3Q7Z407 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC11.63□□□□□ -0.55
CSMD3Q7Z407 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
CSMD3Q7Z407 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
CSMD3Q7Z407 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC11.63□□□□□ -0.55
CSMD3Q7Z407 AC018665.1-201ENST00000622927 1362 ntBASIC11.63□□□□□ -0.55
CSMD3Q7Z407 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
CSMD3Q7Z407 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC11.63□□□□□ -0.55
CSMD3Q7Z407 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC11.63□□□□□ -0.55
CSMD3Q7Z407 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
CSMD3Q7Z407 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
CSMD3Q7Z407 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
CSMD3Q7Z407 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
CSMD3Q7Z407 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC11.63□□□□□ -0.55
CSMD3Q7Z407 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC11.63□□□□□ -0.55
CSMD3Q7Z407 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
CSMD3Q7Z407 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Retrieved 100 of 98,524 protein–RNA pairs in 54.3 ms