Protein–RNA interactions for Protein: Q7Z398

ZNF550, Zinc finger protein 550, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF550Q7Z398 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
ZNF550Q7Z398 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
ZNF550Q7Z398 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
ZNF550Q7Z398 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
ZNF550Q7Z398 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC15.66■□□□□ 0.1
ZNF550Q7Z398 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC15.66■□□□□ 0.1
ZNF550Q7Z398 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
ZNF550Q7Z398 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC15.66■□□□□ 0.1
ZNF550Q7Z398 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
ZNF550Q7Z398 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC15.66■□□□□ 0.1
ZNF550Q7Z398 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC15.66■□□□□ 0.1
ZNF550Q7Z398 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC15.66■□□□□ 0.1
ZNF550Q7Z398 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC15.66■□□□□ 0.1
ZNF550Q7Z398 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
ZNF550Q7Z398 AC148477.8-201ENST00000624298 468 ntBASIC15.66■□□□□ 0.1
ZNF550Q7Z398 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
ZNF550Q7Z398 ABBA01031661.1-201ENST00000634362 1253 ntBASIC15.66■□□□□ 0.1
ZNF550Q7Z398 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
ZNF550Q7Z398 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
ZNF550Q7Z398 OVCH1-AS1-204ENST00000641955 5529 ntBASIC15.66■□□□□ 0.1
ZNF550Q7Z398 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC15.66■□□□□ 0.1
ZNF550Q7Z398 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
ZNF550Q7Z398 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
ZNF550Q7Z398 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC15.66■□□□□ 0.1
ZNF550Q7Z398 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
ZNF550Q7Z398 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC15.66■□□□□ 0.1
ZNF550Q7Z398 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
ZNF550Q7Z398 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
ZNF550Q7Z398 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC15.66■□□□□ 0.1
ZNF550Q7Z398 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
ZNF550Q7Z398 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
ZNF550Q7Z398 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
ZNF550Q7Z398 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ZNF550Q7Z398 PAN3-AS1-201ENST00000563843 1351 ntBASIC15.65■□□□□ 0.1
ZNF550Q7Z398 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
ZNF550Q7Z398 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC15.65■□□□□ 0.1
ZNF550Q7Z398 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ZNF550Q7Z398 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ZNF550Q7Z398 AP002414.1-201ENST00000391405 1147 ntBASIC15.65■□□□□ 0.1
ZNF550Q7Z398 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
ZNF550Q7Z398 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
ZNF550Q7Z398 AL590627.1-203ENST00000421194 1026 ntBASIC15.65■□□□□ 0.1
ZNF550Q7Z398 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC15.65■□□□□ 0.1
ZNF550Q7Z398 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
ZNF550Q7Z398 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
ZNF550Q7Z398 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC15.65■□□□□ 0.1
ZNF550Q7Z398 AP001005.1-201ENST00000571755 1248 ntBASIC15.65■□□□□ 0.1
ZNF550Q7Z398 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC15.65■□□□□ 0.1
ZNF550Q7Z398 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC15.65■□□□□ 0.1
ZNF550Q7Z398 AC064862.7-201ENST00000604520 867 ntBASIC15.65■□□□□ 0.1
ZNF550Q7Z398 AL773604.1-201ENST00000617417 272 ntBASIC15.65■□□□□ 0.1
ZNF550Q7Z398 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC15.65■□□□□ 0.1
ZNF550Q7Z398 AL589182.2-201ENST00000619332 1049 ntBASIC15.65■□□□□ 0.1
ZNF550Q7Z398 AL355877.3-201ENST00000622820 899 ntBASIC15.65■□□□□ 0.1
ZNF550Q7Z398 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
ZNF550Q7Z398 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
ZNF550Q7Z398 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC15.65■□□□□ 0.1
ZNF550Q7Z398 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ZNF550Q7Z398 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
ZNF550Q7Z398 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
ZNF550Q7Z398 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ZNF550Q7Z398 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC15.65■□□□□ 0.1
ZNF550Q7Z398 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
ZNF550Q7Z398 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ZNF550Q7Z398 AGGF1P2-201ENST00000426656 2106 ntBASIC15.65■□□□□ 0.1
ZNF550Q7Z398 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC15.65■□□□□ 0.1
ZNF550Q7Z398 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
ZNF550Q7Z398 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
ZNF550Q7Z398 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ZNF550Q7Z398 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
ZNF550Q7Z398 AL590787.1-201ENST00000568856 1315 ntBASIC15.65■□□□□ 0.1
ZNF550Q7Z398 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
ZNF550Q7Z398 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC15.65■□□□□ 0.1
ZNF550Q7Z398 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC15.65■□□□□ 0.1
ZNF550Q7Z398 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
ZNF550Q7Z398 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC15.64■□□□□ 0.1
ZNF550Q7Z398 AC084018.2-201ENST00000613093 2607 ntBASIC15.64■□□□□ 0.1
ZNF550Q7Z398 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.1
ZNF550Q7Z398 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
ZNF550Q7Z398 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC15.64■□□□□ 0.09
ZNF550Q7Z398 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
ZNF550Q7Z398 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
ZNF550Q7Z398 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
ZNF550Q7Z398 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
ZNF550Q7Z398 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
ZNF550Q7Z398 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
ZNF550Q7Z398 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC15.64■□□□□ 0.09
ZNF550Q7Z398 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC15.64■□□□□ 0.09
ZNF550Q7Z398 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
ZNF550Q7Z398 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
ZNF550Q7Z398 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
ZNF550Q7Z398 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
ZNF550Q7Z398 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
ZNF550Q7Z398 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
ZNF550Q7Z398 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
ZNF550Q7Z398 MED22-202ENST00000371999 987 ntTSL 3 BASIC15.64■□□□□ 0.09
ZNF550Q7Z398 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC15.64■□□□□ 0.09
ZNF550Q7Z398 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC15.64■□□□□ 0.09
ZNF550Q7Z398 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
ZNF550Q7Z398 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms