Protein–RNA interactions for Protein: Q7L5N1

COPS6, COP9 signalosome complex subunit 6, humanhuman

Predictions only

Length 327 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS6Q7L5N1 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
COPS6Q7L5N1 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC21.29■■□□□ 1
COPS6Q7L5N1 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
COPS6Q7L5N1 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC21.29■■□□□ 1
COPS6Q7L5N1 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
COPS6Q7L5N1 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
COPS6Q7L5N1 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
COPS6Q7L5N1 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
COPS6Q7L5N1 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC21.29■■□□□ 1
COPS6Q7L5N1 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
COPS6Q7L5N1 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
COPS6Q7L5N1 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC21.29■■□□□ 1
COPS6Q7L5N1 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC21.29■■□□□ 1
COPS6Q7L5N1 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC21.29■■□□□ 1
COPS6Q7L5N1 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC21.29■■□□□ 1
COPS6Q7L5N1 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
COPS6Q7L5N1 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
COPS6Q7L5N1 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC21.29■■□□□ 1
COPS6Q7L5N1 CDK2AP2P3-201ENST00000422476 372 ntBASIC21.29■■□□□ 1
COPS6Q7L5N1 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC21.29■■□□□ 1
COPS6Q7L5N1 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC21.29■■□□□ 1
COPS6Q7L5N1 KRT8P23-201ENST00000560090 1207 ntBASIC21.29■■□□□ 1
COPS6Q7L5N1 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC21.29■■□□□ 1
COPS6Q7L5N1 AL138918.1-201ENST00000568306 659 ntBASIC21.29■■□□□ 1
COPS6Q7L5N1 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC21.29■■□□□ 1
COPS6Q7L5N1 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC21.29■■□□□ 1
COPS6Q7L5N1 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC21.29■■□□□ 1
COPS6Q7L5N1 BCL2-203ENST00000589955 5011 ntBASIC21.29■■□□□ 1
COPS6Q7L5N1 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
COPS6Q7L5N1 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
COPS6Q7L5N1 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC21.29■■□□□ 1
COPS6Q7L5N1 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
COPS6Q7L5N1 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
COPS6Q7L5N1 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
COPS6Q7L5N1 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC21.28■■□□□ 1
COPS6Q7L5N1 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC21.28■■□□□ 1
COPS6Q7L5N1 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC21.28■■□□□ 1
COPS6Q7L5N1 AC139713.2-201ENST00000641328 2723 ntBASIC21.28■■□□□ 1
COPS6Q7L5N1 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC21.28■■□□□ 1
COPS6Q7L5N1 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
COPS6Q7L5N1 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC21.28■■□□□ 1
COPS6Q7L5N1 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC21.28■■□□□ 1
COPS6Q7L5N1 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC21.28■■□□□ 1
COPS6Q7L5N1 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
COPS6Q7L5N1 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC21.28■■□□□ 1
COPS6Q7L5N1 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
COPS6Q7L5N1 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
COPS6Q7L5N1 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC21.28■■□□□ 1
COPS6Q7L5N1 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC21.28■■□□□ 1
COPS6Q7L5N1 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
COPS6Q7L5N1 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC21.28■■□□□ 1
COPS6Q7L5N1 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC21.28■■□□□ 1
COPS6Q7L5N1 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC21.28■■□□□ 1
COPS6Q7L5N1 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC21.28■■□□□ 1
COPS6Q7L5N1 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC21.28■■□□□ 1
COPS6Q7L5N1 AL512356.2-201ENST00000546955 174 ntBASIC21.28■■□□□ 1
COPS6Q7L5N1 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
COPS6Q7L5N1 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
COPS6Q7L5N1 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC21.28■■□□□ 1
COPS6Q7L5N1 AC015911.4-201ENST00000588022 1070 ntBASIC21.28■■□□□ 1
COPS6Q7L5N1 AC027307.2-201ENST00000591252 911 ntBASIC21.28■■□□□ 1
COPS6Q7L5N1 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC21.28■■□□□ 1
COPS6Q7L5N1 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
COPS6Q7L5N1 AP001059.3-201ENST00000619053 235 ntBASIC21.28■■□□□ 1
COPS6Q7L5N1 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC21.28■■□□□ 1
COPS6Q7L5N1 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC21.28■■□□□ 1
COPS6Q7L5N1 RAB34-224ENST00000636513 888 ntTSL 5 BASIC21.28■■□□□ 1
COPS6Q7L5N1 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC21.28■■□□□ 1
COPS6Q7L5N1 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC21.28■■□□□ 1
COPS6Q7L5N1 LINC00895-201ENST00000629028 1637 ntBASIC21.28■■□□□ 1
COPS6Q7L5N1 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC21.28■■□□□ 1
COPS6Q7L5N1 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
COPS6Q7L5N1 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC21.28■■□□□ 1
COPS6Q7L5N1 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC21.28■■□□□ 1
COPS6Q7L5N1 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
COPS6Q7L5N1 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
COPS6Q7L5N1 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
COPS6Q7L5N1 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
COPS6Q7L5N1 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
COPS6Q7L5N1 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC21.27■■□□□ 1
COPS6Q7L5N1 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC21.27■■□□□ 1
COPS6Q7L5N1 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC21.27■■□□□ 1
COPS6Q7L5N1 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
COPS6Q7L5N1 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC21.27■■□□□ 1
COPS6Q7L5N1 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC21.27■■□□□ 1
COPS6Q7L5N1 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
COPS6Q7L5N1 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
COPS6Q7L5N1 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC21.27■■□□□ 1
COPS6Q7L5N1 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
COPS6Q7L5N1 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC21.27■■□□□ 1
COPS6Q7L5N1 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC21.27■■□□□ 1
COPS6Q7L5N1 RPL30-202ENST00000396070 440 ntTSL 2 BASIC21.27■■□□□ 1
COPS6Q7L5N1 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC21.27■■□□□ 1
COPS6Q7L5N1 SLC25A39P2-201ENST00000537614 270 ntBASIC21.27■■□□□ 1
COPS6Q7L5N1 DUX4L27-201ENST00000554796 1261 ntBASIC21.27■■□□□ 1
COPS6Q7L5N1 AC008267.7-201ENST00000624570 1194 ntBASIC21.27■■□□□ 1
COPS6Q7L5N1 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC21.27■■□□□ 1
COPS6Q7L5N1 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
COPS6Q7L5N1 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
COPS6Q7L5N1 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 66 ms