Protein–RNA interactions for Protein: Q71U36

TUBA1A, Tubulin alpha-1A chain, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1AQ71U36 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
TUBA1AQ71U36 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC15.73■□□□□ 0.11
TUBA1AQ71U36 CIB2-208ENST00000560618 804 ntTSL 2 BASIC15.73■□□□□ 0.11
TUBA1AQ71U36 TPSP2-201ENST00000561760 610 ntBASIC15.73■□□□□ 0.11
TUBA1AQ71U36 AC092329.2-201ENST00000598402 547 ntBASIC15.73■□□□□ 0.11
TUBA1AQ71U36 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC15.73■□□□□ 0.11
TUBA1AQ71U36 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC15.73■□□□□ 0.11
TUBA1AQ71U36 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC15.73■□□□□ 0.11
TUBA1AQ71U36 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC15.73■□□□□ 0.11
TUBA1AQ71U36 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TUBA1AQ71U36 AC132872.4-202ENST00000622924 2756 ntBASIC15.73■□□□□ 0.11
TUBA1AQ71U36 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
TUBA1AQ71U36 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC15.73■□□□□ 0.11
TUBA1AQ71U36 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TUBA1AQ71U36 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
TUBA1AQ71U36 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TUBA1AQ71U36 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC15.72■□□□□ 0.11
TUBA1AQ71U36 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TUBA1AQ71U36 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
TUBA1AQ71U36 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
TUBA1AQ71U36 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
TUBA1AQ71U36 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
TUBA1AQ71U36 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC15.72■□□□□ 0.11
TUBA1AQ71U36 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
TUBA1AQ71U36 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC15.72■□□□□ 0.11
TUBA1AQ71U36 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
TUBA1AQ71U36 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC15.72■□□□□ 0.11
TUBA1AQ71U36 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC15.72■□□□□ 0.11
TUBA1AQ71U36 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC15.72■□□□□ 0.11
TUBA1AQ71U36 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TUBA1AQ71U36 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC15.72■□□□□ 0.11
TUBA1AQ71U36 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC15.72■□□□□ 0.11
TUBA1AQ71U36 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
TUBA1AQ71U36 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
TUBA1AQ71U36 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TUBA1AQ71U36 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TUBA1AQ71U36 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC15.72■□□□□ 0.11
TUBA1AQ71U36 LYSMD4-203ENST00000378904 2122 ntBASIC15.72■□□□□ 0.11
TUBA1AQ71U36 KRT18P65-201ENST00000439811 1286 ntBASIC15.72■□□□□ 0.11
TUBA1AQ71U36 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC15.72■□□□□ 0.11
TUBA1AQ71U36 RN7SL606P-201ENST00000472779 293 ntBASIC15.72■□□□□ 0.11
TUBA1AQ71U36 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC15.72■□□□□ 0.11
TUBA1AQ71U36 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TUBA1AQ71U36 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC15.72■□□□□ 0.11
TUBA1AQ71U36 AC009154.2-201ENST00000621177 724 ntBASIC15.72■□□□□ 0.11
TUBA1AQ71U36 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
TUBA1AQ71U36 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TUBA1AQ71U36 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TUBA1AQ71U36 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
TUBA1AQ71U36 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TUBA1AQ71U36 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TUBA1AQ71U36 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC15.72■□□□□ 0.11
TUBA1AQ71U36 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TUBA1AQ71U36 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
TUBA1AQ71U36 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
TUBA1AQ71U36 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
TUBA1AQ71U36 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
TUBA1AQ71U36 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TUBA1AQ71U36 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
TUBA1AQ71U36 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC15.71■□□□□ 0.11
TUBA1AQ71U36 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC15.71■□□□□ 0.11
TUBA1AQ71U36 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
TUBA1AQ71U36 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC15.71■□□□□ 0.11
TUBA1AQ71U36 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
TUBA1AQ71U36 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC15.71■□□□□ 0.11
TUBA1AQ71U36 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC15.71■□□□□ 0.11
TUBA1AQ71U36 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TUBA1AQ71U36 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TUBA1AQ71U36 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
TUBA1AQ71U36 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TUBA1AQ71U36 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
TUBA1AQ71U36 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
TUBA1AQ71U36 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
TUBA1AQ71U36 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TUBA1AQ71U36 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TUBA1AQ71U36 AL845331.1-201ENST00000424978 1190 ntBASIC15.71■□□□□ 0.11
TUBA1AQ71U36 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
TUBA1AQ71U36 MTCL1P1-201ENST00000446207 792 ntBASIC15.71■□□□□ 0.11
TUBA1AQ71U36 AC068472.1-201ENST00000474589 881 ntBASIC15.71■□□□□ 0.11
TUBA1AQ71U36 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TUBA1AQ71U36 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
TUBA1AQ71U36 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
TUBA1AQ71U36 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC15.71■□□□□ 0.11
TUBA1AQ71U36 AC012313.10-201ENST00000623509 926 ntBASIC15.71■□□□□ 0.11
TUBA1AQ71U36 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC15.71■□□□□ 0.11
TUBA1AQ71U36 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC15.71■□□□□ 0.11
TUBA1AQ71U36 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
TUBA1AQ71U36 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
TUBA1AQ71U36 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
TUBA1AQ71U36 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
TUBA1AQ71U36 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TUBA1AQ71U36 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC15.71■□□□□ 0.11
TUBA1AQ71U36 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TUBA1AQ71U36 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
TUBA1AQ71U36 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC15.71■□□□□ 0.11
TUBA1AQ71U36 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
TUBA1AQ71U36 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
TUBA1AQ71U36 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.1
TUBA1AQ71U36 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.1
TUBA1AQ71U36 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 88 ms