Protein–RNA interactions for Protein: Q6UX27

VSTM1, V-set and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSTM1Q6UX27 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
VSTM1Q6UX27 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
VSTM1Q6UX27 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
VSTM1Q6UX27 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC18.06■□□□□ 0.48
VSTM1Q6UX27 HNRNPRP1-201ENST00000453465 1695 ntBASIC18.06■□□□□ 0.48
VSTM1Q6UX27 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC18.06■□□□□ 0.48
VSTM1Q6UX27 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
VSTM1Q6UX27 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
VSTM1Q6UX27 EGFEM1P-202ENST00000431685 1563 ntBASIC18.05■□□□□ 0.48
VSTM1Q6UX27 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
VSTM1Q6UX27 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
VSTM1Q6UX27 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
VSTM1Q6UX27 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
VSTM1Q6UX27 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
VSTM1Q6UX27 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
VSTM1Q6UX27 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC18.05■□□□□ 0.48
VSTM1Q6UX27 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
VSTM1Q6UX27 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC18.05■□□□□ 0.48
VSTM1Q6UX27 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
VSTM1Q6UX27 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
VSTM1Q6UX27 UPF3AP3-201ENST00000420996 769 ntBASIC18.05■□□□□ 0.48
VSTM1Q6UX27 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC18.05■□□□□ 0.48
VSTM1Q6UX27 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC18.05■□□□□ 0.48
VSTM1Q6UX27 FAM185BP-201ENST00000443595 716 ntBASIC18.05■□□□□ 0.48
VSTM1Q6UX27 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC18.05■□□□□ 0.48
VSTM1Q6UX27 SLC25A6P2-201ENST00000497974 877 ntBASIC18.05■□□□□ 0.48
VSTM1Q6UX27 HOTTIP_1.1-201ENST00000620415 57 ntBASIC18.05■□□□□ 0.48
VSTM1Q6UX27 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC18.05■□□□□ 0.48
VSTM1Q6UX27 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC18.05■□□□□ 0.48
VSTM1Q6UX27 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC18.05■□□□□ 0.48
VSTM1Q6UX27 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
VSTM1Q6UX27 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
VSTM1Q6UX27 AC046158.3-201ENST00000624947 2558 ntBASIC18.05■□□□□ 0.48
VSTM1Q6UX27 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC18.05■□□□□ 0.48
VSTM1Q6UX27 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
VSTM1Q6UX27 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC18.05■□□□□ 0.48
VSTM1Q6UX27 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
VSTM1Q6UX27 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
VSTM1Q6UX27 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
VSTM1Q6UX27 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC18.04■□□□□ 0.48
VSTM1Q6UX27 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC18.04■□□□□ 0.48
VSTM1Q6UX27 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
VSTM1Q6UX27 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC18.04■□□□□ 0.48
VSTM1Q6UX27 AC093525.9-201ENST00000624961 1746 ntBASIC18.04■□□□□ 0.48
VSTM1Q6UX27 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC18.04■□□□□ 0.48
VSTM1Q6UX27 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC18.04■□□□□ 0.48
VSTM1Q6UX27 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC18.04■□□□□ 0.48
VSTM1Q6UX27 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
VSTM1Q6UX27 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC18.04■□□□□ 0.48
VSTM1Q6UX27 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
VSTM1Q6UX27 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
VSTM1Q6UX27 AC116353.5-201ENST00000638148 1699 ntBASIC18.04■□□□□ 0.48
VSTM1Q6UX27 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
VSTM1Q6UX27 PC-214ENST00000628663 1470 ntTSL 5 BASIC18.04■□□□□ 0.48
VSTM1Q6UX27 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
VSTM1Q6UX27 MIR1233-2-201ENST00000408138 82 ntBASIC18.04■□□□□ 0.48
VSTM1Q6UX27 MIR1233-1-201ENST00000408722 82 ntBASIC18.04■□□□□ 0.48
VSTM1Q6UX27 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
VSTM1Q6UX27 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
VSTM1Q6UX27 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC18.04■□□□□ 0.48
VSTM1Q6UX27 MIR3687-2-201ENST00000577708 61 ntBASIC18.04■□□□□ 0.48
VSTM1Q6UX27 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC18.04■□□□□ 0.48
VSTM1Q6UX27 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC18.04■□□□□ 0.48
VSTM1Q6UX27 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC18.04■□□□□ 0.48
VSTM1Q6UX27 MIR3687-1-201ENST00000614492 61 ntBASIC18.04■□□□□ 0.48
VSTM1Q6UX27 AQP6-205ENST00000618286 829 ntTSL 5 BASIC18.04■□□□□ 0.48
VSTM1Q6UX27 AC139530.3-201ENST00000620344 690 ntBASIC18.04■□□□□ 0.48
VSTM1Q6UX27 AC007064.4-201ENST00000637740 555 ntBASIC18.04■□□□□ 0.48
VSTM1Q6UX27 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
VSTM1Q6UX27 AC138932.1-201ENST00000534164 6830 ntBASIC18.04■□□□□ 0.48
VSTM1Q6UX27 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
VSTM1Q6UX27 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
VSTM1Q6UX27 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC18.04■□□□□ 0.48
VSTM1Q6UX27 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
VSTM1Q6UX27 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
VSTM1Q6UX27 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
VSTM1Q6UX27 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
VSTM1Q6UX27 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
VSTM1Q6UX27 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
VSTM1Q6UX27 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
VSTM1Q6UX27 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC18.04■□□□□ 0.48
VSTM1Q6UX27 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC18.04■□□□□ 0.48
VSTM1Q6UX27 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
VSTM1Q6UX27 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
VSTM1Q6UX27 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
VSTM1Q6UX27 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC18.04■□□□□ 0.48
VSTM1Q6UX27 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
VSTM1Q6UX27 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC18.04■□□□□ 0.48
VSTM1Q6UX27 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
VSTM1Q6UX27 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
VSTM1Q6UX27 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC18.03■□□□□ 0.48
VSTM1Q6UX27 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC18.03■□□□□ 0.48
VSTM1Q6UX27 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
VSTM1Q6UX27 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
VSTM1Q6UX27 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC18.03■□□□□ 0.48
VSTM1Q6UX27 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
VSTM1Q6UX27 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
VSTM1Q6UX27 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
VSTM1Q6UX27 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
VSTM1Q6UX27 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 74.9 ms