Protein–RNA interactions for Protein: Q6P161

MRPL54, 39S ribosomal protein L54, mitochondrial, humanhuman

Known RBP Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL54Q6P161 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC12.87□□□□□ -0.35
MRPL54Q6P161 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
MRPL54Q6P161 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
MRPL54Q6P161 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC12.87□□□□□ -0.35
MRPL54Q6P161 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
MRPL54Q6P161 MTHFR-217ENST00000641820 1569 ntBASIC12.87□□□□□ -0.35
MRPL54Q6P161 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC12.87□□□□□ -0.35
MRPL54Q6P161 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
MRPL54Q6P161 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC12.87□□□□□ -0.35
MRPL54Q6P161 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC12.87□□□□□ -0.35
MRPL54Q6P161 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
MRPL54Q6P161 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC12.87□□□□□ -0.35
MRPL54Q6P161 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
MRPL54Q6P161 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC12.87□□□□□ -0.35
MRPL54Q6P161 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC12.87□□□□□ -0.35
MRPL54Q6P161 TK1-204ENST00000590430 683 ntTSL 3 BASIC12.87□□□□□ -0.35
MRPL54Q6P161 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC12.87□□□□□ -0.35
MRPL54Q6P161 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
MRPL54Q6P161 AP000692.2-201ENST00000608391 879 ntBASIC12.87□□□□□ -0.35
MRPL54Q6P161 AL353708.3-201ENST00000610272 989 ntBASIC12.87□□□□□ -0.35
MRPL54Q6P161 AC112497.1-201ENST00000624824 639 ntBASIC12.87□□□□□ -0.35
MRPL54Q6P161 PFKL-212ENST00000628044 129 ntTSL 3 BASIC12.87□□□□□ -0.35
MRPL54Q6P161 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC12.87□□□□□ -0.35
MRPL54Q6P161 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC12.87□□□□□ -0.35
MRPL54Q6P161 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
MRPL54Q6P161 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
MRPL54Q6P161 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
MRPL54Q6P161 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC12.87□□□□□ -0.35
MRPL54Q6P161 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
MRPL54Q6P161 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
MRPL54Q6P161 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
MRPL54Q6P161 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
MRPL54Q6P161 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
MRPL54Q6P161 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
MRPL54Q6P161 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
MRPL54Q6P161 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
MRPL54Q6P161 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
MRPL54Q6P161 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
MRPL54Q6P161 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC12.87□□□□□ -0.35
MRPL54Q6P161 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
MRPL54Q6P161 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
MRPL54Q6P161 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
MRPL54Q6P161 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
MRPL54Q6P161 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
MRPL54Q6P161 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC12.86□□□□□ -0.35
MRPL54Q6P161 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
MRPL54Q6P161 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
MRPL54Q6P161 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC12.86□□□□□ -0.35
MRPL54Q6P161 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
MRPL54Q6P161 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC12.86□□□□□ -0.35
MRPL54Q6P161 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
MRPL54Q6P161 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
MRPL54Q6P161 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
MRPL54Q6P161 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
MRPL54Q6P161 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
MRPL54Q6P161 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
MRPL54Q6P161 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
MRPL54Q6P161 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC12.86□□□□□ -0.35
MRPL54Q6P161 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
MRPL54Q6P161 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
MRPL54Q6P161 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
MRPL54Q6P161 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC12.86□□□□□ -0.35
MRPL54Q6P161 GUSBP6-202ENST00000438529 1198 ntBASIC12.86□□□□□ -0.35
MRPL54Q6P161 AC006970.2-201ENST00000450065 779 ntBASIC12.86□□□□□ -0.35
MRPL54Q6P161 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC12.86□□□□□ -0.35
MRPL54Q6P161 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC12.86□□□□□ -0.35
MRPL54Q6P161 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC12.86□□□□□ -0.35
MRPL54Q6P161 AC098934.4-201ENST00000564127 592 ntBASIC12.86□□□□□ -0.35
MRPL54Q6P161 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC12.86□□□□□ -0.35
MRPL54Q6P161 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC12.86□□□□□ -0.35
MRPL54Q6P161 AMT-233ENST00000636522 1620 ntTSL 2 BASIC12.86□□□□□ -0.35
MRPL54Q6P161 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
MRPL54Q6P161 AL391256.1-201ENST00000443260 1855 ntBASIC12.86□□□□□ -0.35
MRPL54Q6P161 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC12.86□□□□□ -0.35
MRPL54Q6P161 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
MRPL54Q6P161 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
MRPL54Q6P161 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
MRPL54Q6P161 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
MRPL54Q6P161 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
MRPL54Q6P161 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC12.86□□□□□ -0.35
MRPL54Q6P161 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC12.86□□□□□ -0.35
MRPL54Q6P161 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC12.86□□□□□ -0.35
MRPL54Q6P161 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
MRPL54Q6P161 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
MRPL54Q6P161 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
MRPL54Q6P161 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
MRPL54Q6P161 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
MRPL54Q6P161 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC12.86□□□□□ -0.35
MRPL54Q6P161 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
MRPL54Q6P161 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
MRPL54Q6P161 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
MRPL54Q6P161 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC12.85□□□□□ -0.35
MRPL54Q6P161 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC12.85□□□□□ -0.35
MRPL54Q6P161 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
MRPL54Q6P161 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC12.85□□□□□ -0.35
MRPL54Q6P161 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
MRPL54Q6P161 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC12.85□□□□□ -0.35
MRPL54Q6P161 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC12.85□□□□□ -0.35
MRPL54Q6P161 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
MRPL54Q6P161 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms