Protein–RNA interactions for Protein: Q5VTB9

RNF220, E3 ubiquitin-protein ligase RNF220, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220Q5VTB9 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
RNF220Q5VTB9 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC16.42■□□□□ 0.22
RNF220Q5VTB9 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
RNF220Q5VTB9 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC16.42■□□□□ 0.22
RNF220Q5VTB9 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC16.42■□□□□ 0.22
RNF220Q5VTB9 PPOX-219ENST00000544598 813 ntTSL 2 BASIC16.42■□□□□ 0.22
RNF220Q5VTB9 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC16.42■□□□□ 0.22
RNF220Q5VTB9 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC16.42■□□□□ 0.22
RNF220Q5VTB9 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC16.42■□□□□ 0.22
RNF220Q5VTB9 GPR32P1-201ENST00000601788 811 ntBASIC16.42■□□□□ 0.22
RNF220Q5VTB9 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC16.42■□□□□ 0.22
RNF220Q5VTB9 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
RNF220Q5VTB9 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
RNF220Q5VTB9 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RNF220Q5VTB9 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
RNF220Q5VTB9 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC16.42■□□□□ 0.22
RNF220Q5VTB9 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC16.42■□□□□ 0.22
RNF220Q5VTB9 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
RNF220Q5VTB9 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC16.42■□□□□ 0.22
RNF220Q5VTB9 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC16.42■□□□□ 0.22
RNF220Q5VTB9 SNX18-202ENST00000343017 3140 ntBASIC16.42■□□□□ 0.22
RNF220Q5VTB9 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
RNF220Q5VTB9 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
RNF220Q5VTB9 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RNF220Q5VTB9 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RNF220Q5VTB9 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RNF220Q5VTB9 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
RNF220Q5VTB9 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
RNF220Q5VTB9 HLA-J-201ENST00000462773 1622 ntBASIC16.41■□□□□ 0.22
RNF220Q5VTB9 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RNF220Q5VTB9 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RNF220Q5VTB9 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RNF220Q5VTB9 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RNF220Q5VTB9 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC16.41■□□□□ 0.22
RNF220Q5VTB9 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC16.41■□□□□ 0.22
RNF220Q5VTB9 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RNF220Q5VTB9 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RNF220Q5VTB9 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
RNF220Q5VTB9 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC16.41■□□□□ 0.22
RNF220Q5VTB9 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RNF220Q5VTB9 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RNF220Q5VTB9 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC16.41■□□□□ 0.22
RNF220Q5VTB9 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RNF220Q5VTB9 AC112907.2-201ENST00000448639 330 ntBASIC16.41■□□□□ 0.22
RNF220Q5VTB9 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RNF220Q5VTB9 AL359075.1-203ENST00000462729 1002 ntBASIC16.41■□□□□ 0.22
RNF220Q5VTB9 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RNF220Q5VTB9 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC16.41■□□□□ 0.22
RNF220Q5VTB9 LINC01451-201ENST00000623792 534 ntBASIC16.41■□□□□ 0.22
RNF220Q5VTB9 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RNF220Q5VTB9 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RNF220Q5VTB9 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RNF220Q5VTB9 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RNF220Q5VTB9 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RNF220Q5VTB9 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
RNF220Q5VTB9 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
RNF220Q5VTB9 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RNF220Q5VTB9 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RNF220Q5VTB9 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RNF220Q5VTB9 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
RNF220Q5VTB9 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC16.41■□□□□ 0.22
RNF220Q5VTB9 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
RNF220Q5VTB9 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC16.41■□□□□ 0.22
RNF220Q5VTB9 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RNF220Q5VTB9 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC16.41■□□□□ 0.22
RNF220Q5VTB9 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RNF220Q5VTB9 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RNF220Q5VTB9 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RNF220Q5VTB9 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RNF220Q5VTB9 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC16.41■□□□□ 0.22
RNF220Q5VTB9 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
RNF220Q5VTB9 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
RNF220Q5VTB9 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC16.41■□□□□ 0.22
RNF220Q5VTB9 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RNF220Q5VTB9 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RNF220Q5VTB9 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC16.4■□□□□ 0.22
RNF220Q5VTB9 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RNF220Q5VTB9 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RNF220Q5VTB9 AL353692.3-201ENST00000407031 1396 ntBASIC16.4■□□□□ 0.22
RNF220Q5VTB9 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
RNF220Q5VTB9 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RNF220Q5VTB9 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RNF220Q5VTB9 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RNF220Q5VTB9 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC16.4■□□□□ 0.22
RNF220Q5VTB9 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
RNF220Q5VTB9 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC16.4■□□□□ 0.22
RNF220Q5VTB9 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
RNF220Q5VTB9 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC16.4■□□□□ 0.22
RNF220Q5VTB9 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC16.4■□□□□ 0.22
RNF220Q5VTB9 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC16.4■□□□□ 0.22
RNF220Q5VTB9 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
RNF220Q5VTB9 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
RNF220Q5VTB9 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RNF220Q5VTB9 AC092647.4-201ENST00000457211 535 ntBASIC16.4■□□□□ 0.22
RNF220Q5VTB9 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC16.4■□□□□ 0.22
RNF220Q5VTB9 AC112698.1-201ENST00000510299 916 ntBASIC16.4■□□□□ 0.22
RNF220Q5VTB9 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC16.4■□□□□ 0.22
RNF220Q5VTB9 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RNF220Q5VTB9 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC16.4■□□□□ 0.22
RNF220Q5VTB9 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC16.4■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms