Protein–RNA interactions for Protein: Q2Q1W2

TRIM71, E3 ubiquitin-protein ligase TRIM71, humanhuman

Known RBP Predictions only

Length 868 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM71Q2Q1W2 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRIM71Q2Q1W2 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRIM71Q2Q1W2 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TRIM71Q2Q1W2 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TRIM71Q2Q1W2 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TRIM71Q2Q1W2 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC18.38■□□□□ 0.53
TRIM71Q2Q1W2 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRIM71Q2Q1W2 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRIM71Q2Q1W2 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRIM71Q2Q1W2 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRIM71Q2Q1W2 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
TRIM71Q2Q1W2 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
TRIM71Q2Q1W2 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC18.37■□□□□ 0.53
TRIM71Q2Q1W2 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
TRIM71Q2Q1W2 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
TRIM71Q2Q1W2 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
TRIM71Q2Q1W2 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRIM71Q2Q1W2 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRIM71Q2Q1W2 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TRIM71Q2Q1W2 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC18.37■□□□□ 0.53
TRIM71Q2Q1W2 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC18.37■□□□□ 0.53
TRIM71Q2Q1W2 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC18.37■□□□□ 0.53
TRIM71Q2Q1W2 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC18.37■□□□□ 0.53
TRIM71Q2Q1W2 CRB3P1-201ENST00000449338 276 ntBASIC18.37■□□□□ 0.53
TRIM71Q2Q1W2 GAPDHP21-201ENST00000450301 1010 ntBASIC18.37■□□□□ 0.53
TRIM71Q2Q1W2 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC18.37■□□□□ 0.53
TRIM71Q2Q1W2 AC105233.2-201ENST00000523697 349 ntBASIC18.37■□□□□ 0.53
TRIM71Q2Q1W2 AF228730.5-201ENST00000530288 346 ntBASIC18.37■□□□□ 0.53
TRIM71Q2Q1W2 PUDP-206ENST00000540122 825 ntTSL 2 BASIC18.37■□□□□ 0.53
TRIM71Q2Q1W2 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TRIM71Q2Q1W2 AC018529.1-201ENST00000613063 361 ntBASIC18.37■□□□□ 0.53
TRIM71Q2Q1W2 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRIM71Q2Q1W2 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
TRIM71Q2Q1W2 AC100757.3-201ENST00000622361 1406 ntBASIC18.37■□□□□ 0.53
TRIM71Q2Q1W2 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
TRIM71Q2Q1W2 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRIM71Q2Q1W2 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRIM71Q2Q1W2 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC18.37■□□□□ 0.53
TRIM71Q2Q1W2 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TRIM71Q2Q1W2 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRIM71Q2Q1W2 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRIM71Q2Q1W2 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TRIM71Q2Q1W2 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC18.37■□□□□ 0.53
TRIM71Q2Q1W2 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRIM71Q2Q1W2 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
TRIM71Q2Q1W2 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRIM71Q2Q1W2 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRIM71Q2Q1W2 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRIM71Q2Q1W2 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC18.37■□□□□ 0.53
TRIM71Q2Q1W2 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRIM71Q2Q1W2 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC18.36■□□□□ 0.53
TRIM71Q2Q1W2 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
TRIM71Q2Q1W2 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRIM71Q2Q1W2 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRIM71Q2Q1W2 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRIM71Q2Q1W2 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRIM71Q2Q1W2 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC18.36■□□□□ 0.53
TRIM71Q2Q1W2 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRIM71Q2Q1W2 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRIM71Q2Q1W2 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC18.36■□□□□ 0.53
TRIM71Q2Q1W2 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
TRIM71Q2Q1W2 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
TRIM71Q2Q1W2 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRIM71Q2Q1W2 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
TRIM71Q2Q1W2 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC18.36■□□□□ 0.53
TRIM71Q2Q1W2 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
TRIM71Q2Q1W2 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRIM71Q2Q1W2 CDK2AP2P3-201ENST00000422476 372 ntBASIC18.36■□□□□ 0.53
TRIM71Q2Q1W2 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
TRIM71Q2Q1W2 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC18.36■□□□□ 0.53
TRIM71Q2Q1W2 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC18.36■□□□□ 0.53
TRIM71Q2Q1W2 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC18.36■□□□□ 0.53
TRIM71Q2Q1W2 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC18.36■□□□□ 0.53
TRIM71Q2Q1W2 TDG-209ENST00000544861 1387 ntTSL 2 BASIC18.36■□□□□ 0.53
TRIM71Q2Q1W2 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC18.36■□□□□ 0.53
TRIM71Q2Q1W2 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
TRIM71Q2Q1W2 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRIM71Q2Q1W2 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
TRIM71Q2Q1W2 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC18.36■□□□□ 0.53
TRIM71Q2Q1W2 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC18.36■□□□□ 0.53
TRIM71Q2Q1W2 SPDYE12P-201ENST00000618416 771 ntBASIC18.36■□□□□ 0.53
TRIM71Q2Q1W2 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC18.36■□□□□ 0.53
TRIM71Q2Q1W2 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRIM71Q2Q1W2 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRIM71Q2Q1W2 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRIM71Q2Q1W2 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
TRIM71Q2Q1W2 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
TRIM71Q2Q1W2 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC18.35■□□□□ 0.53
TRIM71Q2Q1W2 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TRIM71Q2Q1W2 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRIM71Q2Q1W2 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC18.35■□□□□ 0.53
TRIM71Q2Q1W2 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC18.35■□□□□ 0.53
TRIM71Q2Q1W2 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC18.35■□□□□ 0.53
TRIM71Q2Q1W2 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC18.35■□□□□ 0.53
TRIM71Q2Q1W2 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC18.35■□□□□ 0.53
TRIM71Q2Q1W2 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TRIM71Q2Q1W2 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRIM71Q2Q1W2 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRIM71Q2Q1W2 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRIM71Q2Q1W2 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms