Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
HIST1H3AP68431 ELK2BP-201ENST00000415014 1224 ntBASIC14.84□□□□□ -0.03
HIST1H3AP68431 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC14.84□□□□□ -0.03
HIST1H3AP68431 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC14.84□□□□□ -0.03
HIST1H3AP68431 TOLLIP-AS1-201ENST00000530897 939 ntBASIC14.84□□□□□ -0.03
HIST1H3AP68431 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC14.84□□□□□ -0.03
HIST1H3AP68431 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC14.84□□□□□ -0.03
HIST1H3AP68431 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
HIST1H3AP68431 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
HIST1H3AP68431 AL118508.1-201ENST00000613502 2345 ntBASIC14.84□□□□□ -0.03
HIST1H3AP68431 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
HIST1H3AP68431 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC14.84□□□□□ -0.03
HIST1H3AP68431 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
HIST1H3AP68431 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
HIST1H3AP68431 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
HIST1H3AP68431 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC14.84□□□□□ -0.03
HIST1H3AP68431 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
HIST1H3AP68431 AL391256.1-201ENST00000443260 1855 ntBASIC14.84□□□□□ -0.03
HIST1H3AP68431 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
HIST1H3AP68431 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC14.84□□□□□ -0.03
HIST1H3AP68431 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
HIST1H3AP68431 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
HIST1H3AP68431 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC14.84□□□□□ -0.03
HIST1H3AP68431 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
HIST1H3AP68431 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
HIST1H3AP68431 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
HIST1H3AP68431 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
HIST1H3AP68431 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
HIST1H3AP68431 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC14.83□□□□□ -0.03
HIST1H3AP68431 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.03
HIST1H3AP68431 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
HIST1H3AP68431 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
HIST1H3AP68431 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
HIST1H3AP68431 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC14.83□□□□□ -0.03
HIST1H3AP68431 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC14.83□□□□□ -0.03
HIST1H3AP68431 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC14.83□□□□□ -0.03
HIST1H3AP68431 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
HIST1H3AP68431 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
HIST1H3AP68431 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC14.83□□□□□ -0.04
HIST1H3AP68431 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC14.83□□□□□ -0.04
HIST1H3AP68431 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC14.83□□□□□ -0.04
HIST1H3AP68431 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
HIST1H3AP68431 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
HIST1H3AP68431 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC14.83□□□□□ -0.04
HIST1H3AP68431 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC14.83□□□□□ -0.04
HIST1H3AP68431 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC14.83□□□□□ -0.04
HIST1H3AP68431 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC14.83□□□□□ -0.04
HIST1H3AP68431 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
HIST1H3AP68431 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
HIST1H3AP68431 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
HIST1H3AP68431 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
HIST1H3AP68431 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
HIST1H3AP68431 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC14.83□□□□□ -0.04
HIST1H3AP68431 AC087163.2-201ENST00000457299 853 ntBASIC14.83□□□□□ -0.04
HIST1H3AP68431 EMBP1-201ENST00000458200 901 ntBASIC14.83□□□□□ -0.04
HIST1H3AP68431 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC14.83□□□□□ -0.04
HIST1H3AP68431 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC14.83□□□□□ -0.04
HIST1H3AP68431 RNPS1P1-201ENST00000507437 918 ntBASIC14.83□□□□□ -0.04
HIST1H3AP68431 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC14.83□□□□□ -0.04
HIST1H3AP68431 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC14.83□□□□□ -0.04
HIST1H3AP68431 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC14.83□□□□□ -0.04
HIST1H3AP68431 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC14.83□□□□□ -0.04
HIST1H3AP68431 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
HIST1H3AP68431 AL121912.1-201ENST00000603683 238 ntBASIC14.83□□□□□ -0.04
HIST1H3AP68431 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC14.83□□□□□ -0.04
HIST1H3AP68431 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC14.83□□□□□ -0.04
HIST1H3AP68431 REXO1L3P-201ENST00000622202 1288 ntBASIC14.83□□□□□ -0.04
HIST1H3AP68431 TP73-AS1-207ENST00000624167 988 ntBASIC14.83□□□□□ -0.04
HIST1H3AP68431 AL139011.1-202ENST00000642063 584 ntBASIC14.83□□□□□ -0.04
HIST1H3AP68431 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
HIST1H3AP68431 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC14.83□□□□□ -0.04
HIST1H3AP68431 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
HIST1H3AP68431 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
HIST1H3AP68431 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC14.83□□□□□ -0.04
HIST1H3AP68431 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC14.83□□□□□ -0.04
HIST1H3AP68431 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC14.83□□□□□ -0.04
HIST1H3AP68431 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC14.83□□□□□ -0.04
HIST1H3AP68431 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC14.83□□□□□ -0.04
HIST1H3AP68431 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC14.83□□□□□ -0.04
HIST1H3AP68431 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
HIST1H3AP68431 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC14.83□□□□□ -0.04
HIST1H3AP68431 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
HIST1H3AP68431 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
HIST1H3AP68431 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC14.83□□□□□ -0.04
HIST1H3AP68431 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
HIST1H3AP68431 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
HIST1H3AP68431 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
HIST1H3AP68431 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
HIST1H3AP68431 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC14.82□□□□□ -0.04
HIST1H3AP68431 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
HIST1H3AP68431 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
HIST1H3AP68431 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
HIST1H3AP68431 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC14.82□□□□□ -0.04
HIST1H3AP68431 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
HIST1H3AP68431 AC006277.1-201ENST00000624348 1610 ntBASIC14.82□□□□□ -0.04
HIST1H3AP68431 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
HIST1H3AP68431 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
HIST1H3AP68431 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC14.82□□□□□ -0.04
HIST1H3AP68431 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
HIST1H3AP68431 AC018712.1-201ENST00000455767 687 ntBASIC14.82□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms