Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
UBA52P62987 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
UBA52P62987 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC14.73□□□□□ -0.05
UBA52P62987 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
UBA52P62987 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC14.73□□□□□ -0.05
UBA52P62987 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
UBA52P62987 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
UBA52P62987 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
UBA52P62987 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC14.73□□□□□ -0.05
UBA52P62987 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC14.73□□□□□ -0.05
UBA52P62987 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
UBA52P62987 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
UBA52P62987 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC14.73□□□□□ -0.05
UBA52P62987 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
UBA52P62987 PPOX-214ENST00000535223 664 ntTSL 3 BASIC14.73□□□□□ -0.05
UBA52P62987 ABR-204ENST00000543210 1049 ntTSL 2 BASIC14.73□□□□□ -0.05
UBA52P62987 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
UBA52P62987 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC14.73□□□□□ -0.05
UBA52P62987 VPS51-217ENST00000639871 243 ntTSL 5 BASIC14.73□□□□□ -0.05
UBA52P62987 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
UBA52P62987 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC14.73□□□□□ -0.05
UBA52P62987 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
UBA52P62987 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
UBA52P62987 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC14.73□□□□□ -0.05
UBA52P62987 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
UBA52P62987 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC14.73□□□□□ -0.05
UBA52P62987 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
UBA52P62987 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
UBA52P62987 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
UBA52P62987 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
UBA52P62987 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
UBA52P62987 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
UBA52P62987 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC14.73□□□□□ -0.05
UBA52P62987 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC14.72□□□□□ -0.05
UBA52P62987 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC14.72□□□□□ -0.05
UBA52P62987 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC14.72□□□□□ -0.05
UBA52P62987 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC14.72□□□□□ -0.05
UBA52P62987 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC14.72□□□□□ -0.05
UBA52P62987 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
UBA52P62987 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC14.72□□□□□ -0.05
UBA52P62987 NSUN5P1-202ENST00000421140 1535 ntBASIC14.72□□□□□ -0.05
UBA52P62987 NSUN5P2-203ENST00000457352 1529 ntBASIC14.72□□□□□ -0.05
UBA52P62987 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC14.72□□□□□ -0.05
UBA52P62987 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
UBA52P62987 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
UBA52P62987 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
UBA52P62987 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
UBA52P62987 BID-213ENST00000615414 2236 ntTSL 5 BASIC14.72□□□□□ -0.05
UBA52P62987 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC14.72□□□□□ -0.05
UBA52P62987 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
UBA52P62987 AKR1C7P-201ENST00000305623 895 ntBASIC14.72□□□□□ -0.05
UBA52P62987 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
UBA52P62987 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
UBA52P62987 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
UBA52P62987 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
UBA52P62987 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC14.72□□□□□ -0.05
UBA52P62987 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
UBA52P62987 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
UBA52P62987 NUS1P2-201ENST00000417358 873 ntBASIC14.72□□□□□ -0.05
UBA52P62987 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC14.72□□□□□ -0.05
UBA52P62987 AC009065.1-201ENST00000564055 1225 ntBASIC14.72□□□□□ -0.05
UBA52P62987 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC14.72□□□□□ -0.05
UBA52P62987 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC14.72□□□□□ -0.05
UBA52P62987 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
UBA52P62987 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC14.72□□□□□ -0.05
UBA52P62987 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
UBA52P62987 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC14.72□□□□□ -0.05
UBA52P62987 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
UBA52P62987 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
UBA52P62987 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
UBA52P62987 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
UBA52P62987 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC14.72□□□□□ -0.05
UBA52P62987 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
UBA52P62987 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
UBA52P62987 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC14.72□□□□□ -0.05
UBA52P62987 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
UBA52P62987 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
UBA52P62987 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
UBA52P62987 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC14.71□□□□□ -0.05
UBA52P62987 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC14.71□□□□□ -0.05
UBA52P62987 HLA-A-201ENST00000376802 1334 ntBASIC14.71□□□□□ -0.05
UBA52P62987 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
UBA52P62987 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
UBA52P62987 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
UBA52P62987 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC14.71□□□□□ -0.05
UBA52P62987 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC14.71□□□□□ -0.05
UBA52P62987 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
UBA52P62987 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
UBA52P62987 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC14.71□□□□□ -0.05
UBA52P62987 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
UBA52P62987 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
UBA52P62987 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC14.71□□□□□ -0.05
UBA52P62987 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
UBA52P62987 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC14.71□□□□□ -0.05
UBA52P62987 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
UBA52P62987 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
UBA52P62987 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
UBA52P62987 AL590627.1-203ENST00000421194 1026 ntBASIC14.71□□□□□ -0.05
UBA52P62987 TSPY12P-201ENST00000421279 868 ntBASIC14.71□□□□□ -0.05
UBA52P62987 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC14.71□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms