Protein–RNA interactions for Protein: P62701

RPS4X, 40S ribosomal protein S4, X isoform, humanhuman

Known RBP Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4XP62701 LINC00895-201ENST00000629028 1637 ntBASIC15.34■□□□□ 0.05
RPS4XP62701 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RPS4XP62701 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
RPS4XP62701 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
RPS4XP62701 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
RPS4XP62701 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RPS4XP62701 AL590787.1-201ENST00000568856 1315 ntBASIC15.34■□□□□ 0.05
RPS4XP62701 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC15.34■□□□□ 0.05
RPS4XP62701 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC15.34■□□□□ 0.05
RPS4XP62701 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
RPS4XP62701 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
RPS4XP62701 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
RPS4XP62701 PAN3-AS1-201ENST00000563843 1351 ntBASIC15.34■□□□□ 0.05
RPS4XP62701 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RPS4XP62701 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC15.34■□□□□ 0.05
RPS4XP62701 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC15.34■□□□□ 0.05
RPS4XP62701 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
RPS4XP62701 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
RPS4XP62701 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
RPS4XP62701 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC15.34■□□□□ 0.05
RPS4XP62701 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC15.34■□□□□ 0.05
RPS4XP62701 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RPS4XP62701 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RPS4XP62701 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
RPS4XP62701 TNRC18P3-201ENST00000441896 2691 ntBASIC15.33■□□□□ 0.05
RPS4XP62701 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.05
RPS4XP62701 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
RPS4XP62701 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC15.33■□□□□ 0.05
RPS4XP62701 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
RPS4XP62701 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RPS4XP62701 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RPS4XP62701 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RPS4XP62701 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC15.33■□□□□ 0.04
RPS4XP62701 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RPS4XP62701 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
RPS4XP62701 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RPS4XP62701 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC15.33■□□□□ 0.04
RPS4XP62701 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
RPS4XP62701 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
RPS4XP62701 RPP21-221ENST00000428040 594 ntTSL 2 BASIC15.33■□□□□ 0.04
RPS4XP62701 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC15.33■□□□□ 0.04
RPS4XP62701 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC15.33■□□□□ 0.04
RPS4XP62701 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RPS4XP62701 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
RPS4XP62701 SLC25A1P1-201ENST00000528351 927 ntBASIC15.33■□□□□ 0.04
RPS4XP62701 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC15.33■□□□□ 0.04
RPS4XP62701 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC15.33■□□□□ 0.04
RPS4XP62701 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC15.33■□□□□ 0.04
RPS4XP62701 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC15.33■□□□□ 0.04
RPS4XP62701 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC15.33■□□□□ 0.04
RPS4XP62701 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC15.33■□□□□ 0.04
RPS4XP62701 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC15.33■□□□□ 0.04
RPS4XP62701 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC15.33■□□□□ 0.04
RPS4XP62701 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
RPS4XP62701 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
RPS4XP62701 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RPS4XP62701 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RPS4XP62701 AL021920.2-201ENST00000624828 1351 ntBASIC15.33■□□□□ 0.04
RPS4XP62701 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RPS4XP62701 NCF1C-201ENST00000438382 1427 ntBASIC15.33■□□□□ 0.04
RPS4XP62701 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
RPS4XP62701 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
RPS4XP62701 FOS-208ENST00000555686 1496 ntTSL 2 BASIC15.33■□□□□ 0.04
RPS4XP62701 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
RPS4XP62701 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
RPS4XP62701 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
RPS4XP62701 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC15.33■□□□□ 0.04
RPS4XP62701 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC15.33■□□□□ 0.04
RPS4XP62701 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC15.33■□□□□ 0.04
RPS4XP62701 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RPS4XP62701 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RPS4XP62701 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
RPS4XP62701 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC15.32■□□□□ 0.04
RPS4XP62701 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC15.32■□□□□ 0.04
RPS4XP62701 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC15.32■□□□□ 0.04
RPS4XP62701 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
RPS4XP62701 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
RPS4XP62701 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
RPS4XP62701 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RPS4XP62701 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
RPS4XP62701 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
RPS4XP62701 NABP1-203ENST00000409510 843 ntTSL 5 BASIC15.32■□□□□ 0.04
RPS4XP62701 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC15.32■□□□□ 0.04
RPS4XP62701 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
RPS4XP62701 AC139887.3-201ENST00000568585 713 ntBASIC15.32■□□□□ 0.04
RPS4XP62701 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
RPS4XP62701 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC15.32■□□□□ 0.04
RPS4XP62701 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RPS4XP62701 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC15.32■□□□□ 0.04
RPS4XP62701 AL022326.1-202ENST00000641533 845 ntBASIC15.32■□□□□ 0.04
RPS4XP62701 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
RPS4XP62701 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RPS4XP62701 ZNF259P1-201ENST00000407656 1365 ntBASIC15.32■□□□□ 0.04
RPS4XP62701 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC15.32■□□□□ 0.04
RPS4XP62701 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RPS4XP62701 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC15.32■□□□□ 0.04
RPS4XP62701 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
RPS4XP62701 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RPS4XP62701 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RPS4XP62701 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms