Protein–RNA interactions for Protein: P55316

FOXG1, Forkhead box protein G1, humanhuman

Predicted RBP Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXG1P55316 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
FOXG1P55316 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
FOXG1P55316 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
FOXG1P55316 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
FOXG1P55316 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
FOXG1P55316 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
FOXG1P55316 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
FOXG1P55316 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC14.85□□□□□ -0.03
FOXG1P55316 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
FOXG1P55316 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
FOXG1P55316 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
FOXG1P55316 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC14.85□□□□□ -0.03
FOXG1P55316 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
FOXG1P55316 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
FOXG1P55316 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
FOXG1P55316 AL121761.2-201ENST00000598007 1648 ntBASIC14.84□□□□□ -0.03
FOXG1P55316 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC14.84□□□□□ -0.03
FOXG1P55316 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC14.84□□□□□ -0.03
FOXG1P55316 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC14.84□□□□□ -0.03
FOXG1P55316 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC14.84□□□□□ -0.03
FOXG1P55316 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
FOXG1P55316 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
FOXG1P55316 RNF216P1-203ENST00000404404 2427 ntBASIC14.84□□□□□ -0.03
FOXG1P55316 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC14.84□□□□□ -0.03
FOXG1P55316 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
FOXG1P55316 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
FOXG1P55316 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
FOXG1P55316 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
FOXG1P55316 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
FOXG1P55316 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
FOXG1P55316 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC14.84□□□□□ -0.03
FOXG1P55316 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
FOXG1P55316 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
FOXG1P55316 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC14.84□□□□□ -0.03
FOXG1P55316 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
FOXG1P55316 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
FOXG1P55316 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC14.84□□□□□ -0.03
FOXG1P55316 AC004832.2-201ENST00000426397 482 ntBASIC14.84□□□□□ -0.03
FOXG1P55316 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC14.84□□□□□ -0.03
FOXG1P55316 SMN2-210ENST00000511812 867 ntTSL 2 BASIC14.84□□□□□ -0.03
FOXG1P55316 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC14.84□□□□□ -0.03
FOXG1P55316 PDPK2P-202ENST00000562415 1191 ntBASIC14.84□□□□□ -0.03
FOXG1P55316 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC14.84□□□□□ -0.03
FOXG1P55316 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC14.84□□□□□ -0.03
FOXG1P55316 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
FOXG1P55316 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC14.84□□□□□ -0.03
FOXG1P55316 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC14.84□□□□□ -0.03
FOXG1P55316 AC007064.4-201ENST00000637740 555 ntBASIC14.84□□□□□ -0.03
FOXG1P55316 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
FOXG1P55316 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
FOXG1P55316 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
FOXG1P55316 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
FOXG1P55316 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
FOXG1P55316 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
FOXG1P55316 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC14.84□□□□□ -0.03
FOXG1P55316 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
FOXG1P55316 AL021920.2-201ENST00000624828 1351 ntBASIC14.84□□□□□ -0.03
FOXG1P55316 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
FOXG1P55316 AC105020.1-201ENST00000435356 2205 ntBASIC14.84□□□□□ -0.03
FOXG1P55316 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
FOXG1P55316 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.03
FOXG1P55316 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
FOXG1P55316 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC14.83□□□□□ -0.03
FOXG1P55316 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
FOXG1P55316 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
FOXG1P55316 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
FOXG1P55316 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC14.83□□□□□ -0.04
FOXG1P55316 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
FOXG1P55316 AL645728.1-201ENST00000366221 2101 ntBASIC14.83□□□□□ -0.04
FOXG1P55316 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
FOXG1P55316 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
FOXG1P55316 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
FOXG1P55316 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC14.83□□□□□ -0.04
FOXG1P55316 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
FOXG1P55316 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
FOXG1P55316 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
FOXG1P55316 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC14.83□□□□□ -0.04
FOXG1P55316 HMGA1P7-201ENST00000406908 502 ntBASIC14.83□□□□□ -0.04
FOXG1P55316 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
FOXG1P55316 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC14.83□□□□□ -0.04
FOXG1P55316 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
FOXG1P55316 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC14.83□□□□□ -0.04
FOXG1P55316 FIS1-203ENST00000442303 631 ntTSL 3 BASIC14.83□□□□□ -0.04
FOXG1P55316 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC14.83□□□□□ -0.04
FOXG1P55316 ALG1L5P-201ENST00000482043 771 ntBASIC14.83□□□□□ -0.04
FOXG1P55316 AC112482.1-201ENST00000492080 688 ntBASIC14.83□□□□□ -0.04
FOXG1P55316 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
FOXG1P55316 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC14.83□□□□□ -0.04
FOXG1P55316 RPL28-209ENST00000560055 670 ntTSL 3 BASIC14.83□□□□□ -0.04
FOXG1P55316 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC14.83□□□□□ -0.04
FOXG1P55316 MPDU1-223ENST00000582151 728 ntBASIC14.83□□□□□ -0.04
FOXG1P55316 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC14.83□□□□□ -0.04
FOXG1P55316 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
FOXG1P55316 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
FOXG1P55316 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
FOXG1P55316 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
FOXG1P55316 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
FOXG1P55316 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
FOXG1P55316 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC14.83□□□□□ -0.04
FOXG1P55316 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms