Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
SRP9P49458 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SRP9P49458 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC15.13■□□□□ 0.01
SRP9P49458 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SRP9P49458 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC15.13■□□□□ 0.01
SRP9P49458 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
SRP9P49458 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC15.13■□□□□ 0.01
SRP9P49458 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SRP9P49458 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
SRP9P49458 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SRP9P49458 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
SRP9P49458 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
SRP9P49458 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SRP9P49458 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SRP9P49458 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC15.12■□□□□ 0.01
SRP9P49458 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SRP9P49458 KRT8P47-201ENST00000604727 1398 ntBASIC15.12■□□□□ 0.01
SRP9P49458 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SRP9P49458 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SRP9P49458 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SRP9P49458 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC15.12■□□□□ 0.01
SRP9P49458 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
SRP9P49458 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC15.12■□□□□ 0.01
SRP9P49458 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC15.12■□□□□ 0.01
SRP9P49458 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SRP9P49458 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SRP9P49458 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SRP9P49458 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC15.12■□□□□ 0.01
SRP9P49458 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SRP9P49458 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SRP9P49458 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC15.12■□□□□ 0.01
SRP9P49458 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SRP9P49458 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SRP9P49458 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC15.12■□□□□ 0.01
SRP9P49458 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SRP9P49458 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SRP9P49458 DDX43P3-201ENST00000441064 443 ntBASIC15.12■□□□□ 0.01
SRP9P49458 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC15.12■□□□□ 0.01
SRP9P49458 NMU-205ENST00000511469 756 ntTSL 3 BASIC15.12■□□□□ 0.01
SRP9P49458 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SRP9P49458 AC009533.2-201ENST00000543664 586 ntBASIC15.12■□□□□ 0.01
SRP9P49458 MPI-205ENST00000562606 1052 ntTSL 3 BASIC15.12■□□□□ 0.01
SRP9P49458 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC15.12■□□□□ 0.01
SRP9P49458 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC15.12■□□□□ 0.01
SRP9P49458 MIR3652-201ENST00000579335 131 ntBASIC15.12■□□□□ 0.01
SRP9P49458 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SRP9P49458 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
SRP9P49458 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC15.12■□□□□ 0.01
SRP9P49458 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SRP9P49458 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
SRP9P49458 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
SRP9P49458 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
SRP9P49458 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC15.12■□□□□ 0.01
SRP9P49458 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC15.12■□□□□ 0.01
SRP9P49458 AC097374.2-201ENST00000618617 1306 ntBASIC15.12■□□□□ 0.01
SRP9P49458 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
SRP9P49458 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SRP9P49458 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
SRP9P49458 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
SRP9P49458 AC023824.1-201ENST00000562945 2975 ntBASIC15.12■□□□□ 0.01
SRP9P49458 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
SRP9P49458 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC15.12■□□□□ 0.01
SRP9P49458 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SRP9P49458 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC15.11■□□□□ 0.01
SRP9P49458 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC15.11■□□□□ 0.01
SRP9P49458 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC15.11■□□□□ 0.01
SRP9P49458 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
SRP9P49458 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
SRP9P49458 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SRP9P49458 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SRP9P49458 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC15.11■□□□□ 0.01
SRP9P49458 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC15.11■□□□□ 0.01
SRP9P49458 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC15.11■□□□□ 0.01
SRP9P49458 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
SRP9P49458 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SRP9P49458 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SRP9P49458 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SRP9P49458 AL513523.2-202ENST00000427283 2040 ntBASIC15.11■□□□□ 0.01
SRP9P49458 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SRP9P49458 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC15.11■□□□□ 0.01
SRP9P49458 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
SRP9P49458 AL845331.1-201ENST00000424978 1190 ntBASIC15.11■□□□□ 0.01
SRP9P49458 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SRP9P49458 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC15.11■□□□□ 0.01
SRP9P49458 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC15.11■□□□□ 0.01
SRP9P49458 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC15.11■□□□□ 0.01
SRP9P49458 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC15.11■□□□□ 0.01
SRP9P49458 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC15.11■□□□□ 0.01
SRP9P49458 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SRP9P49458 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
SRP9P49458 AC022188.1-201ENST00000620960 1664 ntBASIC15.11■□□□□ 0.01
SRP9P49458 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
SRP9P49458 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
SRP9P49458 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SRP9P49458 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SRP9P49458 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC15.11■□□□□ 0.01
SRP9P49458 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC15.11■□□□□ 0.01
SRP9P49458 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SRP9P49458 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC15.11■□□□□ 0.01
SRP9P49458 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms