Protein–RNA interactions for Protein: P49427

CDC34, Ubiquitin-conjugating enzyme E2 R1, humanhuman

Predicted RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC34P49427 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CDC34P49427 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
CDC34P49427 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
CDC34P49427 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC13.46□□□□□ -0.25
CDC34P49427 RPS2P55-201ENST00000397318 883 ntBASIC13.46□□□□□ -0.25
CDC34P49427 AC096633.1-201ENST00000422446 749 ntBASIC13.46□□□□□ -0.25
CDC34P49427 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC13.46□□□□□ -0.25
CDC34P49427 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC13.46□□□□□ -0.25
CDC34P49427 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC13.46□□□□□ -0.25
CDC34P49427 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC13.46□□□□□ -0.25
CDC34P49427 AL359736.2-201ENST00000621992 437 ntBASIC13.46□□□□□ -0.25
CDC34P49427 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CDC34P49427 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
CDC34P49427 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
CDC34P49427 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC13.46□□□□□ -0.25
CDC34P49427 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC13.46□□□□□ -0.25
CDC34P49427 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
CDC34P49427 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
CDC34P49427 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC13.46□□□□□ -0.26
CDC34P49427 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
CDC34P49427 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.26
CDC34P49427 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
CDC34P49427 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC13.46□□□□□ -0.26
CDC34P49427 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
CDC34P49427 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
CDC34P49427 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
CDC34P49427 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
CDC34P49427 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
CDC34P49427 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CDC34P49427 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CDC34P49427 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
CDC34P49427 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CDC34P49427 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
CDC34P49427 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
CDC34P49427 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC13.45□□□□□ -0.26
CDC34P49427 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CDC34P49427 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CDC34P49427 ALOX12P2-203ENST00000570921 1945 ntBASIC13.45□□□□□ -0.26
CDC34P49427 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CDC34P49427 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CDC34P49427 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC13.45□□□□□ -0.26
CDC34P49427 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CDC34P49427 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
CDC34P49427 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC13.45□□□□□ -0.26
CDC34P49427 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CDC34P49427 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CDC34P49427 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
CDC34P49427 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
CDC34P49427 UNC93B2-201ENST00000285383 730 ntBASIC13.45□□□□□ -0.26
CDC34P49427 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
CDC34P49427 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CDC34P49427 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CDC34P49427 ABHD17AP1-201ENST00000358206 933 ntBASIC13.45□□□□□ -0.26
CDC34P49427 HLA-L-209ENST00000420110 1011 ntBASIC13.45□□□□□ -0.26
CDC34P49427 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
CDC34P49427 PENK-204ENST00000518770 863 ntTSL 2 BASIC13.45□□□□□ -0.26
CDC34P49427 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC13.45□□□□□ -0.26
CDC34P49427 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC13.45□□□□□ -0.26
CDC34P49427 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
CDC34P49427 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC13.45□□□□□ -0.26
CDC34P49427 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC13.45□□□□□ -0.26
CDC34P49427 C2orf69P3-201ENST00000565542 1120 ntBASIC13.45□□□□□ -0.26
CDC34P49427 NEK4P2-201ENST00000580004 1012 ntBASIC13.45□□□□□ -0.26
CDC34P49427 AC004263.2-201ENST00000617183 678 ntBASIC13.45□□□□□ -0.26
CDC34P49427 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC13.45□□□□□ -0.26
CDC34P49427 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
CDC34P49427 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC13.45□□□□□ -0.26
CDC34P49427 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CDC34P49427 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
CDC34P49427 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC13.45□□□□□ -0.26
CDC34P49427 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CDC34P49427 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CDC34P49427 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CDC34P49427 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CDC34P49427 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
CDC34P49427 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
CDC34P49427 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CDC34P49427 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
CDC34P49427 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC13.45□□□□□ -0.26
CDC34P49427 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
CDC34P49427 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC13.44□□□□□ -0.26
CDC34P49427 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC13.44□□□□□ -0.26
CDC34P49427 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CDC34P49427 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CDC34P49427 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
CDC34P49427 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
CDC34P49427 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
CDC34P49427 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
CDC34P49427 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
CDC34P49427 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
CDC34P49427 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CDC34P49427 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC13.44□□□□□ -0.26
CDC34P49427 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
CDC34P49427 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
CDC34P49427 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
CDC34P49427 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CDC34P49427 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CDC34P49427 DDT-203ENST00000403754 569 ntTSL 3 BASIC13.44□□□□□ -0.26
CDC34P49427 DDT-206ENST00000430101 573 ntTSL 2 BASIC13.44□□□□□ -0.26
CDC34P49427 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC13.44□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms