Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC15□□□□□ -0.01
SOX2P48431 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC15□□□□□ -0.01
SOX2P48431 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC15□□□□□ -0.01
SOX2P48431 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SOX2P48431 FRMD6-AS1-201ENST00000617151 2229 ntBASIC15□□□□□ -0.01
SOX2P48431 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SOX2P48431 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
SOX2P48431 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SOX2P48431 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC14.99□□□□□ -0.01
SOX2P48431 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
SOX2P48431 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
SOX2P48431 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
SOX2P48431 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC14.99□□□□□ -0.01
SOX2P48431 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SOX2P48431 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
SOX2P48431 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
SOX2P48431 BANP-204ENST00000393208 2283 ntTSL 2 BASIC14.99□□□□□ -0.01
SOX2P48431 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SOX2P48431 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC14.99□□□□□ -0.01
SOX2P48431 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC14.99□□□□□ -0.01
SOX2P48431 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
SOX2P48431 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC14.99□□□□□ -0.01
SOX2P48431 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
SOX2P48431 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC14.99□□□□□ -0.01
SOX2P48431 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
SOX2P48431 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SOX2P48431 RNF152P1-201ENST00000397754 604 ntBASIC14.99□□□□□ -0.01
SOX2P48431 AC092647.4-201ENST00000457211 535 ntBASIC14.99□□□□□ -0.01
SOX2P48431 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SOX2P48431 STK19B-204ENST00000512515 211 ntBASIC14.99□□□□□ -0.01
SOX2P48431 AC093827.2-201ENST00000512654 315 ntBASIC14.99□□□□□ -0.01
SOX2P48431 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC14.99□□□□□ -0.01
SOX2P48431 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC14.99□□□□□ -0.01
SOX2P48431 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC14.99□□□□□ -0.01
SOX2P48431 HYMAI.1-201ENST00000620949 238 ntBASIC14.99□□□□□ -0.01
SOX2P48431 AC124864.1-201ENST00000623408 392 ntBASIC14.99□□□□□ -0.01
SOX2P48431 DFFB-212ENST00000625756 649 ntTSL 5 BASIC14.99□□□□□ -0.01
SOX2P48431 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC14.99□□□□□ -0.01
SOX2P48431 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
SOX2P48431 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC14.99□□□□□ -0.01
SOX2P48431 GPR89P-201ENST00000407924 1495 ntBASIC14.99□□□□□ -0.01
SOX2P48431 HLA-A-202ENST00000376806 1854 ntBASIC14.99□□□□□ -0.01
SOX2P48431 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
SOX2P48431 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
SOX2P48431 MYB-201ENST00000316528 3571 ntTSL 5 BASIC14.99□□□□□ -0.01
SOX2P48431 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
SOX2P48431 MYB-241ENST00000616088 3573 ntTSL 5 BASIC14.99□□□□□ -0.01
SOX2P48431 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC14.99□□□□□ -0.01
SOX2P48431 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC14.99□□□□□ -0.01
SOX2P48431 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SOX2P48431 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SOX2P48431 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
SOX2P48431 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
SOX2P48431 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC14.98□□□□□ -0.01
SOX2P48431 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
SOX2P48431 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
SOX2P48431 PGR-209ENST00000617858 2816 ntTSL 5 BASIC14.98□□□□□ -0.01
SOX2P48431 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC14.98□□□□□ -0.01
SOX2P48431 PAUPAR-201ENST00000630360 2965 ntBASIC14.98□□□□□ -0.01
SOX2P48431 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SOX2P48431 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SOX2P48431 FUT8-AS1-201ENST00000621019 1521 ntBASIC14.98□□□□□ -0.01
SOX2P48431 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SOX2P48431 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC14.98□□□□□ -0.01
SOX2P48431 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
SOX2P48431 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC14.98□□□□□ -0.01
SOX2P48431 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
SOX2P48431 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
SOX2P48431 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SOX2P48431 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
SOX2P48431 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SOX2P48431 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
SOX2P48431 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SOX2P48431 FAM220CP-201ENST00000395253 831 ntBASIC14.98□□□□□ -0.01
SOX2P48431 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC14.98□□□□□ -0.01
SOX2P48431 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC14.98□□□□□ -0.01
SOX2P48431 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC14.98□□□□□ -0.01
SOX2P48431 KRT18P57-201ENST00000443599 1254 ntBASIC14.98□□□□□ -0.01
SOX2P48431 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC14.98□□□□□ -0.01
SOX2P48431 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC14.98□□□□□ -0.01
SOX2P48431 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC14.98□□□□□ -0.01
SOX2P48431 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
SOX2P48431 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC14.98□□□□□ -0.01
SOX2P48431 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
SOX2P48431 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SOX2P48431 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
SOX2P48431 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
SOX2P48431 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SOX2P48431 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC14.98□□□□□ -0.01
SOX2P48431 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
SOX2P48431 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
SOX2P48431 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
SOX2P48431 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SOX2P48431 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
SOX2P48431 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC14.98□□□□□ -0.01
SOX2P48431 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
SOX2P48431 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SOX2P48431 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC14.98□□□□□ -0.01
SOX2P48431 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SOX2P48431 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms