Protein–RNA interactions for Protein: P45452

MMP13, Collagenase 3, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13P45452 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
MMP13P45452 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC17.69■□□□□ 0.42
MMP13P45452 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC17.69■□□□□ 0.42
MMP13P45452 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
MMP13P45452 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
MMP13P45452 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC17.69■□□□□ 0.42
MMP13P45452 AL135999.2-201ENST00000622438 1686 ntBASIC17.69■□□□□ 0.42
MMP13P45452 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
MMP13P45452 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
MMP13P45452 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
MMP13P45452 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC17.69■□□□□ 0.42
MMP13P45452 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
MMP13P45452 EMBP1-201ENST00000458200 901 ntBASIC17.69■□□□□ 0.42
MMP13P45452 BX005266.1-201ENST00000473402 457 ntBASIC17.69■□□□□ 0.42
MMP13P45452 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC17.69■□□□□ 0.42
MMP13P45452 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC17.69■□□□□ 0.42
MMP13P45452 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC17.69■□□□□ 0.42
MMP13P45452 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
MMP13P45452 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC17.69■□□□□ 0.42
MMP13P45452 COPE-211ENST00000600932 1144 ntTSL 5 BASIC17.69■□□□□ 0.42
MMP13P45452 IRF5-214ENST00000613821 595 ntTSL 5 BASIC17.69■□□□□ 0.42
MMP13P45452 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
MMP13P45452 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
MMP13P45452 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
MMP13P45452 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
MMP13P45452 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC17.69■□□□□ 0.42
MMP13P45452 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
MMP13P45452 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
MMP13P45452 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC17.69■□□□□ 0.42
MMP13P45452 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC17.69■□□□□ 0.42
MMP13P45452 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC17.69■□□□□ 0.42
MMP13P45452 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
MMP13P45452 AL513523.2-202ENST00000427283 2040 ntBASIC17.69■□□□□ 0.42
MMP13P45452 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
MMP13P45452 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
MMP13P45452 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
MMP13P45452 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
MMP13P45452 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
MMP13P45452 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
MMP13P45452 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
MMP13P45452 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
MMP13P45452 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
MMP13P45452 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
MMP13P45452 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC17.68■□□□□ 0.42
MMP13P45452 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC17.68■□□□□ 0.42
MMP13P45452 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC17.68■□□□□ 0.42
MMP13P45452 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
MMP13P45452 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
MMP13P45452 AC103702.1-201ENST00000548801 2630 ntBASIC17.68■□□□□ 0.42
MMP13P45452 IRF8-202ENST00000562492 946 ntTSL 3 BASIC17.68■□□□□ 0.42
MMP13P45452 NKAPP1-205ENST00000585790 367 ntBASIC17.68■□□□□ 0.42
MMP13P45452 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
MMP13P45452 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC17.68■□□□□ 0.42
MMP13P45452 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC17.68■□□□□ 0.42
MMP13P45452 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
MMP13P45452 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
MMP13P45452 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC17.68■□□□□ 0.42
MMP13P45452 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
MMP13P45452 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
MMP13P45452 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC17.68■□□□□ 0.42
MMP13P45452 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
MMP13P45452 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
MMP13P45452 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
MMP13P45452 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
MMP13P45452 AC004817.3-201ENST00000602957 2129 ntBASIC17.68■□□□□ 0.42
MMP13P45452 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
MMP13P45452 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
MMP13P45452 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC17.67■□□□□ 0.42
MMP13P45452 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
MMP13P45452 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
MMP13P45452 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC17.67■□□□□ 0.42
MMP13P45452 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC17.67■□□□□ 0.42
MMP13P45452 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC17.67■□□□□ 0.42
MMP13P45452 AC093525.9-201ENST00000624961 1746 ntBASIC17.67■□□□□ 0.42
MMP13P45452 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC17.67■□□□□ 0.42
MMP13P45452 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
MMP13P45452 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
MMP13P45452 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
MMP13P45452 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
MMP13P45452 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
MMP13P45452 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC17.67■□□□□ 0.42
MMP13P45452 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
MMP13P45452 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
MMP13P45452 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
MMP13P45452 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
MMP13P45452 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC17.67■□□□□ 0.42
MMP13P45452 SCARNA2-201ENST00000458748 420 ntBASIC17.67■□□□□ 0.42
MMP13P45452 S100A2-206ENST00000497140 697 ntTSL 2 BASIC17.67■□□□□ 0.42
MMP13P45452 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC17.67■□□□□ 0.42
MMP13P45452 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC17.67■□□□□ 0.42
MMP13P45452 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC17.67■□□□□ 0.42
MMP13P45452 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC17.67■□□□□ 0.42
MMP13P45452 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
MMP13P45452 RN7SL510P-201ENST00000581311 263 ntBASIC17.67■□□□□ 0.42
MMP13P45452 AL691432.3-201ENST00000621860 400 ntBASIC17.67■□□□□ 0.42
MMP13P45452 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
MMP13P45452 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
MMP13P45452 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
MMP13P45452 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
MMP13P45452 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms