Protein–RNA interactions for Protein: P19013

KRT4, Keratin, type II cytoskeletal 4, humanhuman

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT4P19013 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
KRT4P19013 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
KRT4P19013 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
KRT4P19013 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
KRT4P19013 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
KRT4P19013 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
KRT4P19013 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
KRT4P19013 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
KRT4P19013 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
KRT4P19013 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
KRT4P19013 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.33
KRT4P19013 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
KRT4P19013 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
KRT4P19013 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
KRT4P19013 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
KRT4P19013 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC17.08■□□□□ 0.32
KRT4P19013 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC17.08■□□□□ 0.32
KRT4P19013 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC17.08■□□□□ 0.32
KRT4P19013 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
KRT4P19013 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
KRT4P19013 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
KRT4P19013 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC17.08■□□□□ 0.32
KRT4P19013 AC112907.2-201ENST00000448639 330 ntBASIC17.08■□□□□ 0.32
KRT4P19013 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
KRT4P19013 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC17.08■□□□□ 0.32
KRT4P19013 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
KRT4P19013 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC17.08■□□□□ 0.32
KRT4P19013 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
KRT4P19013 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
KRT4P19013 AC024909.3-201ENST00000611513 2257 ntBASIC17.08■□□□□ 0.32
KRT4P19013 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
KRT4P19013 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC17.08■□□□□ 0.32
KRT4P19013 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.32
KRT4P19013 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC17.08■□□□□ 0.32
KRT4P19013 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC17.08■□□□□ 0.32
KRT4P19013 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
KRT4P19013 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
KRT4P19013 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
KRT4P19013 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC17.07■□□□□ 0.32
KRT4P19013 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
KRT4P19013 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
KRT4P19013 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
KRT4P19013 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
KRT4P19013 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
KRT4P19013 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
KRT4P19013 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
KRT4P19013 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC17.07■□□□□ 0.32
KRT4P19013 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC17.07■□□□□ 0.32
KRT4P19013 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC17.07■□□□□ 0.32
KRT4P19013 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
KRT4P19013 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
KRT4P19013 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
KRT4P19013 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC17.07■□□□□ 0.32
KRT4P19013 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
KRT4P19013 AC087499.1-201ENST00000418141 1075 ntBASIC17.07■□□□□ 0.32
KRT4P19013 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC17.07■□□□□ 0.32
KRT4P19013 AC117947.1-201ENST00000427448 529 ntBASIC17.07■□□□□ 0.32
KRT4P19013 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
KRT4P19013 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC17.07■□□□□ 0.32
KRT4P19013 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC17.07■□□□□ 0.32
KRT4P19013 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC17.07■□□□□ 0.32
KRT4P19013 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
KRT4P19013 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC17.07■□□□□ 0.32
KRT4P19013 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC17.07■□□□□ 0.32
KRT4P19013 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC17.07■□□□□ 0.32
KRT4P19013 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC17.07■□□□□ 0.32
KRT4P19013 AC005336.2-201ENST00000593183 939 ntBASIC17.07■□□□□ 0.32
KRT4P19013 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC17.07■□□□□ 0.32
KRT4P19013 HYMAI.1-201ENST00000620949 238 ntBASIC17.07■□□□□ 0.32
KRT4P19013 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC17.07■□□□□ 0.32
KRT4P19013 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC17.07■□□□□ 0.32
KRT4P19013 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
KRT4P19013 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
KRT4P19013 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
KRT4P19013 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
KRT4P19013 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
KRT4P19013 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC17.07■□□□□ 0.32
KRT4P19013 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC17.07■□□□□ 0.32
KRT4P19013 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
KRT4P19013 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
KRT4P19013 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC17.07■□□□□ 0.32
KRT4P19013 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
KRT4P19013 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC17.07■□□□□ 0.32
KRT4P19013 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
KRT4P19013 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC17.07■□□□□ 0.32
KRT4P19013 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
KRT4P19013 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
KRT4P19013 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
KRT4P19013 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
KRT4P19013 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
KRT4P19013 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
KRT4P19013 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
KRT4P19013 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
KRT4P19013 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
KRT4P19013 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC17.06■□□□□ 0.32
KRT4P19013 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC17.06■□□□□ 0.32
KRT4P19013 ME2P1-201ENST00000426028 1970 ntBASIC17.06■□□□□ 0.32
KRT4P19013 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
KRT4P19013 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC17.06■□□□□ 0.32
KRT4P19013 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms