Protein–RNA interactions for Protein: P07988

SFTPB, Pulmonary surfactant-associated protein B, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPBP07988 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SFTPBP07988 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
SFTPBP07988 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SFTPBP07988 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SFTPBP07988 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SFTPBP07988 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SFTPBP07988 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
SFTPBP07988 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SFTPBP07988 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
SFTPBP07988 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
SFTPBP07988 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SFTPBP07988 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC14.82□□□□□ -0.04
SFTPBP07988 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
SFTPBP07988 MYCLP1-201ENST00000372451 1075 ntBASIC14.82□□□□□ -0.04
SFTPBP07988 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SFTPBP07988 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SFTPBP07988 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC14.82□□□□□ -0.04
SFTPBP07988 KRT17P6-201ENST00000453795 1220 ntBASIC14.82□□□□□ -0.04
SFTPBP07988 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
SFTPBP07988 IGHV3-52-201ENST00000519770 353 ntBASIC14.82□□□□□ -0.04
SFTPBP07988 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC14.82□□□□□ -0.04
SFTPBP07988 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC14.82□□□□□ -0.04
SFTPBP07988 AP005901.3-202ENST00000581653 237 ntBASIC14.82□□□□□ -0.04
SFTPBP07988 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC14.82□□□□□ -0.04
SFTPBP07988 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC14.82□□□□□ -0.04
SFTPBP07988 AL732292.2-201ENST00000609649 430 ntBASIC14.82□□□□□ -0.04
SFTPBP07988 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SFTPBP07988 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC14.82□□□□□ -0.04
SFTPBP07988 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SFTPBP07988 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SFTPBP07988 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC14.82□□□□□ -0.04
SFTPBP07988 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC14.82□□□□□ -0.04
SFTPBP07988 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
SFTPBP07988 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SFTPBP07988 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SFTPBP07988 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
SFTPBP07988 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC14.82□□□□□ -0.04
SFTPBP07988 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
SFTPBP07988 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC14.82□□□□□ -0.04
SFTPBP07988 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SFTPBP07988 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
SFTPBP07988 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
SFTPBP07988 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SFTPBP07988 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SFTPBP07988 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC14.81□□□□□ -0.04
SFTPBP07988 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
SFTPBP07988 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SFTPBP07988 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SFTPBP07988 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
SFTPBP07988 AL596257.1-201ENST00000641463 2694 ntBASIC14.81□□□□□ -0.04
SFTPBP07988 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SFTPBP07988 AC105020.1-201ENST00000435356 2205 ntBASIC14.81□□□□□ -0.04
SFTPBP07988 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
SFTPBP07988 AC093525.9-201ENST00000624961 1746 ntBASIC14.81□□□□□ -0.04
SFTPBP07988 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SFTPBP07988 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SFTPBP07988 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SFTPBP07988 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SFTPBP07988 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SFTPBP07988 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
SFTPBP07988 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC14.81□□□□□ -0.04
SFTPBP07988 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SFTPBP07988 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC14.81□□□□□ -0.04
SFTPBP07988 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SFTPBP07988 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SFTPBP07988 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
SFTPBP07988 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
SFTPBP07988 SLC25A1P3-201ENST00000395415 828 ntBASIC14.81□□□□□ -0.04
SFTPBP07988 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC14.81□□□□□ -0.04
SFTPBP07988 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC14.81□□□□□ -0.04
SFTPBP07988 NUS1P1-201ENST00000446295 882 ntBASIC14.81□□□□□ -0.04
SFTPBP07988 VENTXP7-201ENST00000475503 772 ntBASIC14.81□□□□□ -0.04
SFTPBP07988 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC14.81□□□□□ -0.04
SFTPBP07988 ABR-204ENST00000543210 1049 ntTSL 2 BASIC14.81□□□□□ -0.04
SFTPBP07988 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC14.81□□□□□ -0.04
SFTPBP07988 ABR-217ENST00000572441 563 ntTSL 4 BASIC14.81□□□□□ -0.04
SFTPBP07988 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC14.81□□□□□ -0.04
SFTPBP07988 AC099336.1-202ENST00000602961 463 ntBASIC14.81□□□□□ -0.04
SFTPBP07988 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC14.81□□□□□ -0.04
SFTPBP07988 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
SFTPBP07988 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC14.81□□□□□ -0.04
SFTPBP07988 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC14.81□□□□□ -0.04
SFTPBP07988 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SFTPBP07988 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC14.81□□□□□ -0.04
SFTPBP07988 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
SFTPBP07988 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SFTPBP07988 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC14.81□□□□□ -0.04
SFTPBP07988 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC14.81□□□□□ -0.04
SFTPBP07988 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SFTPBP07988 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC14.81□□□□□ -0.04
SFTPBP07988 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SFTPBP07988 AL049757.1-201ENST00000616842 1596 ntBASIC14.81□□□□□ -0.04
SFTPBP07988 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SFTPBP07988 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SFTPBP07988 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SFTPBP07988 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SFTPBP07988 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC14.81□□□□□ -0.04
SFTPBP07988 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
SFTPBP07988 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
SFTPBP07988 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms