Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 RN7SL589P-201ENST00000481268 310 ntBASIC17.12■□□□□ 0.33
RETP07949 AC125807.1-201ENST00000483097 614 ntBASIC17.12■□□□□ 0.33
RETP07949 MEIS3P1-201ENST00000495167 958 ntBASIC17.12■□□□□ 0.33
RETP07949 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
RETP07949 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
RETP07949 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC17.12■□□□□ 0.33
RETP07949 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RETP07949 AC140878.1-201ENST00000565277 250 ntBASIC17.12■□□□□ 0.33
RETP07949 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC17.12■□□□□ 0.33
RETP07949 SERF2-217ENST00000630046 862 ntTSL 5 BASIC17.12■□□□□ 0.33
RETP07949 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
RETP07949 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC17.12■□□□□ 0.33
RETP07949 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RETP07949 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC17.12■□□□□ 0.33
RETP07949 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
RETP07949 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RETP07949 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC17.12■□□□□ 0.33
RETP07949 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RETP07949 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RETP07949 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RETP07949 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RETP07949 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RETP07949 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RETP07949 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RETP07949 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RETP07949 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RETP07949 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
RETP07949 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
RETP07949 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RETP07949 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
RETP07949 AC093010.1-201ENST00000473625 1624 ntBASIC17.11■□□□□ 0.33
RETP07949 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC17.11■□□□□ 0.33
RETP07949 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RETP07949 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC17.11■□□□□ 0.33
RETP07949 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RETP07949 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RETP07949 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RETP07949 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RETP07949 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
RETP07949 BAD-202ENST00000394531 631 ntTSL 3 BASIC17.11■□□□□ 0.33
RETP07949 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC17.11■□□□□ 0.33
RETP07949 RAC2-204ENST00000406508 893 ntTSL 5 BASIC17.11■□□□□ 0.33
RETP07949 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
RETP07949 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RETP07949 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC17.11■□□□□ 0.33
RETP07949 IGHV3-52-201ENST00000519770 353 ntBASIC17.11■□□□□ 0.33
RETP07949 SLC25A39P2-201ENST00000537614 270 ntBASIC17.11■□□□□ 0.33
RETP07949 BAD-207ENST00000544785 525 ntTSL 3 BASIC17.11■□□□□ 0.33
RETP07949 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
RETP07949 TMED1-207ENST00000591695 809 ntTSL 5 BASIC17.11■□□□□ 0.33
RETP07949 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC17.11■□□□□ 0.33
RETP07949 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RETP07949 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC17.11■□□□□ 0.33
RETP07949 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RETP07949 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
RETP07949 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RETP07949 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RETP07949 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
RETP07949 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RETP07949 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
RETP07949 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RETP07949 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RETP07949 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RETP07949 AC009336.1-201ENST00000608941 1553 ntBASIC17.11■□□□□ 0.33
RETP07949 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
RETP07949 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RETP07949 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RETP07949 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC17.1■□□□□ 0.33
RETP07949 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
RETP07949 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
RETP07949 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC17.1■□□□□ 0.33
RETP07949 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RETP07949 AC141586.5-201ENST00000624546 2050 ntBASIC17.1■□□□□ 0.33
RETP07949 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RETP07949 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RETP07949 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RETP07949 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RETP07949 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
RETP07949 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC17.1■□□□□ 0.33
RETP07949 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC17.1■□□□□ 0.33
RETP07949 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
RETP07949 CRB3P1-201ENST00000449338 276 ntBASIC17.1■□□□□ 0.33
RETP07949 AC079140.1-201ENST00000508039 487 ntBASIC17.1■□□□□ 0.33
RETP07949 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC17.1■□□□□ 0.33
RETP07949 ACTL9-202ENST00000612068 1252 ntBASIC17.1■□□□□ 0.33
RETP07949 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RETP07949 AC012313.1-201ENST00000593393 3059 ntBASIC17.1■□□□□ 0.33
RETP07949 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RETP07949 FO538757.1-201ENST00000623083 1397 ntBASIC17.1■□□□□ 0.33
RETP07949 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RETP07949 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RETP07949 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC17.1■□□□□ 0.33
RETP07949 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RETP07949 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
RETP07949 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC17.1■□□□□ 0.33
RETP07949 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RETP07949 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RETP07949 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
RETP07949 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
RETP07949 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 89.4 ms