Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC17.2■□□□□ 0.34
HLA-DQB2P05538 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC17.2■□□□□ 0.34
HLA-DQB2P05538 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
HLA-DQB2P05538 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC17.2■□□□□ 0.34
HLA-DQB2P05538 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
HLA-DQB2P05538 AC026396.1-201ENST00000419388 421 ntBASIC17.2■□□□□ 0.34
HLA-DQB2P05538 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC17.2■□□□□ 0.34
HLA-DQB2P05538 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC17.2■□□□□ 0.34
HLA-DQB2P05538 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC17.2■□□□□ 0.34
HLA-DQB2P05538 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
HLA-DQB2P05538 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC17.2■□□□□ 0.34
HLA-DQB2P05538 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC17.2■□□□□ 0.34
HLA-DQB2P05538 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
HLA-DQB2P05538 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
HLA-DQB2P05538 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC17.2■□□□□ 0.34
HLA-DQB2P05538 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC17.2■□□□□ 0.34
HLA-DQB2P05538 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC17.2■□□□□ 0.34
HLA-DQB2P05538 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
HLA-DQB2P05538 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
HLA-DQB2P05538 AL603756.1-201ENST00000606511 2163 ntBASIC17.2■□□□□ 0.34
HLA-DQB2P05538 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC17.2■□□□□ 0.34
HLA-DQB2P05538 LINC00895-201ENST00000629028 1637 ntBASIC17.2■□□□□ 0.34
HLA-DQB2P05538 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC17.2■□□□□ 0.34
HLA-DQB2P05538 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
HLA-DQB2P05538 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
HLA-DQB2P05538 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
HLA-DQB2P05538 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC17.2■□□□□ 0.34
HLA-DQB2P05538 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
HLA-DQB2P05538 AC099398.1-201ENST00000567919 2776 ntBASIC17.2■□□□□ 0.34
HLA-DQB2P05538 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
HLA-DQB2P05538 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC17.2■□□□□ 0.34
HLA-DQB2P05538 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
HLA-DQB2P05538 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
HLA-DQB2P05538 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
HLA-DQB2P05538 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC17.2■□□□□ 0.34
HLA-DQB2P05538 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
HLA-DQB2P05538 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC17.19■□□□□ 0.34
HLA-DQB2P05538 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
HLA-DQB2P05538 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
HLA-DQB2P05538 CYP51A1P2-201ENST00000419457 1499 ntBASIC17.19■□□□□ 0.34
HLA-DQB2P05538 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC17.19■□□□□ 0.34
HLA-DQB2P05538 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC17.19■□□□□ 0.34
HLA-DQB2P05538 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
HLA-DQB2P05538 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
HLA-DQB2P05538 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC17.19■□□□□ 0.34
HLA-DQB2P05538 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
HLA-DQB2P05538 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC17.19■□□□□ 0.34
HLA-DQB2P05538 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
HLA-DQB2P05538 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC17.19■□□□□ 0.34
HLA-DQB2P05538 AP002490.2-201ENST00000524791 560 ntBASIC17.19■□□□□ 0.34
HLA-DQB2P05538 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC17.19■□□□□ 0.34
HLA-DQB2P05538 CD63-204ENST00000546939 779 ntTSL 3 BASIC17.19■□□□□ 0.34
HLA-DQB2P05538 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC17.19■□□□□ 0.34
HLA-DQB2P05538 MIR4751-201ENST00000578027 74 ntBASIC17.19■□□□□ 0.34
HLA-DQB2P05538 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
HLA-DQB2P05538 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC17.19■□□□□ 0.34
HLA-DQB2P05538 HARS-204ENST00000438307 1789 ntTSL 2 BASIC17.19■□□□□ 0.34
HLA-DQB2P05538 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
HLA-DQB2P05538 AC092171.3-201ENST00000610122 2651 ntBASIC17.19■□□□□ 0.34
HLA-DQB2P05538 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
HLA-DQB2P05538 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
HLA-DQB2P05538 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC17.19■□□□□ 0.34
HLA-DQB2P05538 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC17.19■□□□□ 0.34
HLA-DQB2P05538 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
HLA-DQB2P05538 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
HLA-DQB2P05538 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
HLA-DQB2P05538 PC-204ENST00000524491 1714 ntTSL 2 BASIC17.18■□□□□ 0.34
HLA-DQB2P05538 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
HLA-DQB2P05538 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC17.18■□□□□ 0.34
HLA-DQB2P05538 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC17.18■□□□□ 0.34
HLA-DQB2P05538 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
HLA-DQB2P05538 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
HLA-DQB2P05538 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
HLA-DQB2P05538 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
HLA-DQB2P05538 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC17.18■□□□□ 0.34
HLA-DQB2P05538 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
HLA-DQB2P05538 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
HLA-DQB2P05538 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC17.18■□□□□ 0.34
HLA-DQB2P05538 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC17.18■□□□□ 0.34
HLA-DQB2P05538 SLC4A1APP2-201ENST00000424054 1259 ntBASIC17.18■□□□□ 0.34
HLA-DQB2P05538 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC17.18■□□□□ 0.34
HLA-DQB2P05538 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
HLA-DQB2P05538 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC17.18■□□□□ 0.34
HLA-DQB2P05538 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC17.18■□□□□ 0.34
HLA-DQB2P05538 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC17.18■□□□□ 0.34
HLA-DQB2P05538 MPDU1-223ENST00000582151 728 ntBASIC17.18■□□□□ 0.34
HLA-DQB2P05538 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
HLA-DQB2P05538 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC17.18■□□□□ 0.34
HLA-DQB2P05538 AC010654.1-201ENST00000615722 808 ntBASIC17.18■□□□□ 0.34
HLA-DQB2P05538 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
HLA-DQB2P05538 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
HLA-DQB2P05538 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
HLA-DQB2P05538 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
HLA-DQB2P05538 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
HLA-DQB2P05538 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC17.18■□□□□ 0.34
HLA-DQB2P05538 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
HLA-DQB2P05538 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
HLA-DQB2P05538 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
HLA-DQB2P05538 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC17.18■□□□□ 0.34
HLA-DQB2P05538 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms