Protein–RNA interactions for Protein: P05114

HMGN1, Non-histone chromosomal protein HMG-14, humanhuman

Predictions only

Length 100 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P05114 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
HMGN1P05114 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
HMGN1P05114 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
HMGN1P05114 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC15.42■□□□□ 0.06
HMGN1P05114 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC15.42■□□□□ 0.06
HMGN1P05114 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
HMGN1P05114 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
HMGN1P05114 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
HMGN1P05114 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
HMGN1P05114 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
HMGN1P05114 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
HMGN1P05114 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
HMGN1P05114 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC15.42■□□□□ 0.06
HMGN1P05114 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
HMGN1P05114 AL645728.1-201ENST00000366221 2101 ntBASIC15.42■□□□□ 0.06
HMGN1P05114 CTNS-203ENST00000399306 803 ntTSL 3 BASIC15.42■□□□□ 0.06
HMGN1P05114 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC15.42■□□□□ 0.06
HMGN1P05114 AL845331.1-201ENST00000424978 1190 ntBASIC15.42■□□□□ 0.06
HMGN1P05114 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC15.42■□□□□ 0.06
HMGN1P05114 VENTXP7-201ENST00000475503 772 ntBASIC15.42■□□□□ 0.06
HMGN1P05114 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC15.42■□□□□ 0.06
HMGN1P05114 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC15.42■□□□□ 0.06
HMGN1P05114 AC083849.1-201ENST00000615227 514 ntBASIC15.42■□□□□ 0.06
HMGN1P05114 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC15.42■□□□□ 0.06
HMGN1P05114 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
HMGN1P05114 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC15.42■□□□□ 0.06
HMGN1P05114 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC15.42■□□□□ 0.06
HMGN1P05114 AD001527.2-201ENST00000622994 785 ntBASIC15.42■□□□□ 0.06
HMGN1P05114 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
HMGN1P05114 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
HMGN1P05114 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
HMGN1P05114 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
HMGN1P05114 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC15.42■□□□□ 0.06
HMGN1P05114 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC15.42■□□□□ 0.06
HMGN1P05114 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC15.42■□□□□ 0.06
HMGN1P05114 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC15.42■□□□□ 0.06
HMGN1P05114 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
HMGN1P05114 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC15.42■□□□□ 0.06
HMGN1P05114 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC15.42■□□□□ 0.06
HMGN1P05114 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC15.42■□□□□ 0.06
HMGN1P05114 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
HMGN1P05114 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
HMGN1P05114 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
HMGN1P05114 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC15.42■□□□□ 0.06
HMGN1P05114 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
HMGN1P05114 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
HMGN1P05114 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC15.41■□□□□ 0.06
HMGN1P05114 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
HMGN1P05114 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC15.41■□□□□ 0.06
HMGN1P05114 AC092850.2-201ENST00000623821 2697 ntBASIC15.41■□□□□ 0.06
HMGN1P05114 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
HMGN1P05114 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC15.41■□□□□ 0.06
HMGN1P05114 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
HMGN1P05114 AC079328.2-201ENST00000561241 3354 ntBASIC15.41■□□□□ 0.06
HMGN1P05114 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
HMGN1P05114 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
HMGN1P05114 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
HMGN1P05114 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
HMGN1P05114 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
HMGN1P05114 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
HMGN1P05114 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC15.41■□□□□ 0.06
HMGN1P05114 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC15.41■□□□□ 0.06
HMGN1P05114 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC15.41■□□□□ 0.06
HMGN1P05114 AC006011.2-201ENST00000621313 1158 ntBASIC15.41■□□□□ 0.06
HMGN1P05114 AC073592.5-201ENST00000624854 528 ntBASIC15.41■□□□□ 0.06
HMGN1P05114 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
HMGN1P05114 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC15.41■□□□□ 0.06
HMGN1P05114 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
HMGN1P05114 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC15.41■□□□□ 0.06
HMGN1P05114 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
HMGN1P05114 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
HMGN1P05114 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
HMGN1P05114 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
HMGN1P05114 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
HMGN1P05114 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC15.41■□□□□ 0.06
HMGN1P05114 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
HMGN1P05114 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC15.4■□□□□ 0.06
HMGN1P05114 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC15.4■□□□□ 0.06
HMGN1P05114 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC15.4■□□□□ 0.06
HMGN1P05114 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC15.4■□□□□ 0.06
HMGN1P05114 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
HMGN1P05114 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC15.4■□□□□ 0.06
HMGN1P05114 AL021920.2-201ENST00000624828 1351 ntBASIC15.4■□□□□ 0.06
HMGN1P05114 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
HMGN1P05114 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
HMGN1P05114 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
HMGN1P05114 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC15.4■□□□□ 0.06
HMGN1P05114 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
HMGN1P05114 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC15.4■□□□□ 0.06
HMGN1P05114 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC15.4■□□□□ 0.06
HMGN1P05114 AC011467.2-201ENST00000598425 242 ntBASIC15.4■□□□□ 0.06
HMGN1P05114 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC15.4■□□□□ 0.06
HMGN1P05114 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC15.4■□□□□ 0.06
HMGN1P05114 AC022188.1-201ENST00000620960 1664 ntBASIC15.4■□□□□ 0.06
HMGN1P05114 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
HMGN1P05114 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
HMGN1P05114 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC15.4■□□□□ 0.06
HMGN1P05114 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
HMGN1P05114 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
HMGN1P05114 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms