Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC14.31□□□□□ -0.12
CD74P04233 GCSHP5-201ENST00000443090 522 ntBASIC14.31□□□□□ -0.12
CD74P04233 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CD74P04233 AC098590.1-201ENST00000468126 897 ntBASIC14.31□□□□□ -0.12
CD74P04233 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC14.31□□□□□ -0.12
CD74P04233 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC14.31□□□□□ -0.12
CD74P04233 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
CD74P04233 AC141257.4-201ENST00000634557 245 ntBASIC14.31□□□□□ -0.12
CD74P04233 AC136944.6-201ENST00000634818 245 ntBASIC14.31□□□□□ -0.12
CD74P04233 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
CD74P04233 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CD74P04233 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
CD74P04233 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CD74P04233 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CD74P04233 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC14.31□□□□□ -0.12
CD74P04233 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CD74P04233 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CD74P04233 MME-217ENST00000616757 1315 ntTSL 5 BASIC14.31□□□□□ -0.12
CD74P04233 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CD74P04233 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC14.31□□□□□ -0.12
CD74P04233 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
CD74P04233 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC14.31□□□□□ -0.12
CD74P04233 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
CD74P04233 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CD74P04233 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC14.31□□□□□ -0.12
CD74P04233 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
CD74P04233 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
CD74P04233 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CD74P04233 AL353593.2-201ENST00000602529 1483 ntBASIC14.31□□□□□ -0.12
CD74P04233 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC14.31□□□□□ -0.12
CD74P04233 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
CD74P04233 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CD74P04233 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC14.31□□□□□ -0.12
CD74P04233 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC14.3□□□□□ -0.12
CD74P04233 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
CD74P04233 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC14.3□□□□□ -0.12
CD74P04233 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC14.3□□□□□ -0.12
CD74P04233 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC14.3□□□□□ -0.12
CD74P04233 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
CD74P04233 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CD74P04233 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC14.3□□□□□ -0.12
CD74P04233 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
CD74P04233 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
CD74P04233 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
CD74P04233 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC14.3□□□□□ -0.12
CD74P04233 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CD74P04233 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CD74P04233 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CD74P04233 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC14.3□□□□□ -0.12
CD74P04233 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CD74P04233 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CD74P04233 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC14.3□□□□□ -0.12
CD74P04233 NAPSB-206ENST00000562112 1266 ntBASIC14.3□□□□□ -0.12
CD74P04233 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC14.3□□□□□ -0.12
CD74P04233 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CD74P04233 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
CD74P04233 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC14.3□□□□□ -0.12
CD74P04233 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
CD74P04233 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC14.3□□□□□ -0.12
CD74P04233 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
CD74P04233 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
CD74P04233 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CD74P04233 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CD74P04233 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC14.3□□□□□ -0.12
CD74P04233 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC14.3□□□□□ -0.12
CD74P04233 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
CD74P04233 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CD74P04233 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
CD74P04233 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CD74P04233 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC14.3□□□□□ -0.12
CD74P04233 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CD74P04233 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CD74P04233 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC14.3□□□□□ -0.12
CD74P04233 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC14.3□□□□□ -0.12
CD74P04233 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC14.3□□□□□ -0.12
CD74P04233 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CD74P04233 AC022532.1-201ENST00000624563 1728 ntBASIC14.29□□□□□ -0.12
CD74P04233 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
CD74P04233 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
CD74P04233 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
CD74P04233 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
CD74P04233 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
CD74P04233 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC14.29□□□□□ -0.12
CD74P04233 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CD74P04233 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
CD74P04233 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CD74P04233 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
CD74P04233 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
CD74P04233 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CD74P04233 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CD74P04233 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC14.29□□□□□ -0.12
CD74P04233 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CD74P04233 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CD74P04233 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CD74P04233 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
CD74P04233 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CD74P04233 MIR662-201ENST00000384847 95 ntBASIC14.29□□□□□ -0.12
CD74P04233 FAM8A6P-201ENST00000407496 1135 ntBASIC14.29□□□□□ -0.12
CD74P04233 TSPY7P-201ENST00000431358 1114 ntBASIC14.29□□□□□ -0.12
CD74P04233 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 59.7 ms