Protein–RNA interactions for Protein: P02656

APOC3, Apolipoprotein C-III, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC3P02656 AC004817.3-201ENST00000602957 2129 ntBASIC13.64□□□□□ -0.23
APOC3P02656 STX18-AS1-207ENST00000610009 2406 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
APOC3P02656 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
APOC3P02656 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
APOC3P02656 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
APOC3P02656 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
APOC3P02656 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
APOC3P02656 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
APOC3P02656 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
APOC3P02656 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
APOC3P02656 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
APOC3P02656 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
APOC3P02656 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC13.64□□□□□ -0.23
APOC3P02656 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
APOC3P02656 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC13.64□□□□□ -0.23
APOC3P02656 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
APOC3P02656 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC13.64□□□□□ -0.23
APOC3P02656 MIR149-201ENST00000384879 89 ntBASIC13.64□□□□□ -0.23
APOC3P02656 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
APOC3P02656 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC13.64□□□□□ -0.23
APOC3P02656 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC13.64□□□□□ -0.23
APOC3P02656 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC13.64□□□□□ -0.23
APOC3P02656 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
APOC3P02656 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
APOC3P02656 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
APOC3P02656 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
APOC3P02656 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
APOC3P02656 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
APOC3P02656 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC13.64□□□□□ -0.23
APOC3P02656 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
APOC3P02656 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
APOC3P02656 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
APOC3P02656 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
APOC3P02656 TNIK-204ENST00000436636 6970 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
APOC3P02656 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
APOC3P02656 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
APOC3P02656 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC13.64□□□□□ -0.23
APOC3P02656 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
APOC3P02656 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC13.64□□□□□ -0.23
APOC3P02656 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
APOC3P02656 SCARF1-201ENST00000263071 3443 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
APOC3P02656 ZNF790-207ENST00000614179 2361 ntAPPRIS P1 TSL 3 BASIC13.64□□□□□ -0.23
APOC3P02656 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC13.64□□□□□ -0.23
APOC3P02656 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC13.64□□□□□ -0.23
APOC3P02656 NXN-202ENST00000537628 1340 ntTSL 3 BASIC13.64□□□□□ -0.23
APOC3P02656 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
APOC3P02656 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
APOC3P02656 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC13.63□□□□□ -0.23
APOC3P02656 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
APOC3P02656 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
APOC3P02656 HEPACAM-201ENST00000298251 3602 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
APOC3P02656 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC13.63□□□□□ -0.23
APOC3P02656 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
APOC3P02656 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
APOC3P02656 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC13.63□□□□□ -0.23
APOC3P02656 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC13.63□□□□□ -0.23
APOC3P02656 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
APOC3P02656 OR2C3-201ENST00000366487 8467 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
APOC3P02656 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
APOC3P02656 BMP1-204ENST00000397814 836 ntTSL 4 BASIC13.63□□□□□ -0.23
APOC3P02656 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
APOC3P02656 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC13.63□□□□□ -0.23
APOC3P02656 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC13.63□□□□□ -0.23
APOC3P02656 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC13.63□□□□□ -0.23
APOC3P02656 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
APOC3P02656 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
APOC3P02656 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
APOC3P02656 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
APOC3P02656 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
APOC3P02656 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
APOC3P02656 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC13.63□□□□□ -0.23
APOC3P02656 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
APOC3P02656 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
APOC3P02656 AL391256.1-201ENST00000443260 1855 ntBASIC13.63□□□□□ -0.23
APOC3P02656 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC13.63□□□□□ -0.23
APOC3P02656 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
APOC3P02656 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
APOC3P02656 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
APOC3P02656 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
APOC3P02656 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
APOC3P02656 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
APOC3P02656 AL109659.2-201ENST00000606809 1674 ntBASIC13.63□□□□□ -0.23
APOC3P02656 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
APOC3P02656 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
APOC3P02656 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
APOC3P02656 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
APOC3P02656 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
APOC3P02656 ARHGAP23P1-201ENST00000562773 1937 ntBASIC13.62□□□□□ -0.23
APOC3P02656 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
APOC3P02656 LGALSL-201ENST00000238875 3926 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
APOC3P02656 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
APOC3P02656 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
APOC3P02656 TNFRSF11A-205ENST00000616710 3809 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
APOC3P02656 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
APOC3P02656 CABP4-201ENST00000325656 2559 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
APOC3P02656 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
APOC3P02656 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
APOC3P02656 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC13.62□□□□□ -0.23
APOC3P02656 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
APOC3P02656 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms