Protein–RNA interactions for Protein: P01906

HLA-DQA2, HLA class II histocompatibility antigen, DQ alpha 2 chain, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA2P01906 NSUN5P2-203ENST00000457352 1529 ntBASIC15.3■□□□□ 0.04
HLA-DQA2P01906 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC15.3■□□□□ 0.04
HLA-DQA2P01906 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
HLA-DQA2P01906 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC15.3■□□□□ 0.04
HLA-DQA2P01906 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC15.3■□□□□ 0.04
HLA-DQA2P01906 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
HLA-DQA2P01906 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC15.3■□□□□ 0.04
HLA-DQA2P01906 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
HLA-DQA2P01906 AC124947.2-201ENST00000547118 1133 ntBASIC15.3■□□□□ 0.04
HLA-DQA2P01906 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
HLA-DQA2P01906 COX5A-202ENST00000562233 441 ntTSL 3 BASIC15.3■□□□□ 0.04
HLA-DQA2P01906 AC074051.2-201ENST00000565115 352 ntBASIC15.3■□□□□ 0.04
HLA-DQA2P01906 COX5A-204ENST00000567270 579 ntTSL 3 BASIC15.3■□□□□ 0.04
HLA-DQA2P01906 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
HLA-DQA2P01906 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
HLA-DQA2P01906 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC15.3■□□□□ 0.04
HLA-DQA2P01906 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC15.3■□□□□ 0.04
HLA-DQA2P01906 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC15.3■□□□□ 0.04
HLA-DQA2P01906 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
HLA-DQA2P01906 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
HLA-DQA2P01906 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
HLA-DQA2P01906 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
HLA-DQA2P01906 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
HLA-DQA2P01906 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
HLA-DQA2P01906 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
HLA-DQA2P01906 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
HLA-DQA2P01906 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
HLA-DQA2P01906 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
HLA-DQA2P01906 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC15.3■□□□□ 0.04
HLA-DQA2P01906 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HLA-DQA2P01906 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HLA-DQA2P01906 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
HLA-DQA2P01906 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
HLA-DQA2P01906 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
HLA-DQA2P01906 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
HLA-DQA2P01906 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
HLA-DQA2P01906 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
HLA-DQA2P01906 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HLA-DQA2P01906 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
HLA-DQA2P01906 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC15.29■□□□□ 0.04
HLA-DQA2P01906 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
HLA-DQA2P01906 STX3-203ENST00000529177 1571 ntTSL 2 BASIC15.29■□□□□ 0.04
HLA-DQA2P01906 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
HLA-DQA2P01906 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
HLA-DQA2P01906 GPR89P-201ENST00000407924 1495 ntBASIC15.29■□□□□ 0.04
HLA-DQA2P01906 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
HLA-DQA2P01906 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
HLA-DQA2P01906 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC15.29■□□□□ 0.04
HLA-DQA2P01906 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
HLA-DQA2P01906 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HLA-DQA2P01906 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
HLA-DQA2P01906 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
HLA-DQA2P01906 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
HLA-DQA2P01906 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
HLA-DQA2P01906 DRAXINP1-201ENST00000437611 948 ntBASIC15.29■□□□□ 0.04
HLA-DQA2P01906 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC15.29■□□□□ 0.04
HLA-DQA2P01906 AC104819.1-201ENST00000504587 486 ntBASIC15.29■□□□□ 0.04
HLA-DQA2P01906 AP000867.3-201ENST00000524675 377 ntBASIC15.29■□□□□ 0.04
HLA-DQA2P01906 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HLA-DQA2P01906 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC15.29■□□□□ 0.04
HLA-DQA2P01906 TPSP2-201ENST00000561760 610 ntBASIC15.29■□□□□ 0.04
HLA-DQA2P01906 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC15.29■□□□□ 0.04
HLA-DQA2P01906 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC15.29■□□□□ 0.04
HLA-DQA2P01906 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC15.29■□□□□ 0.04
HLA-DQA2P01906 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
HLA-DQA2P01906 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC15.29■□□□□ 0.04
HLA-DQA2P01906 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC15.29■□□□□ 0.04
HLA-DQA2P01906 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
HLA-DQA2P01906 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC15.29■□□□□ 0.04
HLA-DQA2P01906 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
HLA-DQA2P01906 AD001527.2-201ENST00000622994 785 ntBASIC15.29■□□□□ 0.04
HLA-DQA2P01906 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
HLA-DQA2P01906 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HLA-DQA2P01906 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC15.29■□□□□ 0.04
HLA-DQA2P01906 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
HLA-DQA2P01906 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC15.29■□□□□ 0.04
HLA-DQA2P01906 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC15.29■□□□□ 0.04
HLA-DQA2P01906 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC15.29■□□□□ 0.04
HLA-DQA2P01906 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HLA-DQA2P01906 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
HLA-DQA2P01906 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
HLA-DQA2P01906 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC15.29■□□□□ 0.04
HLA-DQA2P01906 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC15.29■□□□□ 0.04
HLA-DQA2P01906 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
HLA-DQA2P01906 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC15.29■□□□□ 0.04
HLA-DQA2P01906 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HLA-DQA2P01906 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC15.29■□□□□ 0.04
HLA-DQA2P01906 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
HLA-DQA2P01906 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC15.29■□□□□ 0.04
HLA-DQA2P01906 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC15.29■□□□□ 0.04
HLA-DQA2P01906 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HLA-DQA2P01906 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
HLA-DQA2P01906 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
HLA-DQA2P01906 OS9-205ENST00000413095 1660 ntTSL 2 BASIC15.28■□□□□ 0.04
HLA-DQA2P01906 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
HLA-DQA2P01906 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
HLA-DQA2P01906 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HLA-DQA2P01906 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HLA-DQA2P01906 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HLA-DQA2P01906 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms