Protein–RNA interactions for Protein: O96008

TOMM40, Mitochondrial import receptor subunit TOM40 homolog, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOMM40O96008 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TOMM40O96008 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TOMM40O96008 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
TOMM40O96008 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
TOMM40O96008 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TOMM40O96008 TP73-AS1-210ENST00000637775 1455 ntBASIC13.36□□□□□ -0.27
TOMM40O96008 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TOMM40O96008 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
TOMM40O96008 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC13.35□□□□□ -0.27
TOMM40O96008 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
TOMM40O96008 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC13.35□□□□□ -0.27
TOMM40O96008 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
TOMM40O96008 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TOMM40O96008 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
TOMM40O96008 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
TOMM40O96008 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
TOMM40O96008 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TOMM40O96008 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
TOMM40O96008 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
TOMM40O96008 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
TOMM40O96008 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
TOMM40O96008 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TOMM40O96008 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TOMM40O96008 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
TOMM40O96008 FXN-203ENST00000396366 922 ntTSL 2 BASIC13.35□□□□□ -0.27
TOMM40O96008 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
TOMM40O96008 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC13.35□□□□□ -0.27
TOMM40O96008 AC091607.1-201ENST00000490318 1060 ntBASIC13.35□□□□□ -0.27
TOMM40O96008 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC13.35□□□□□ -0.27
TOMM40O96008 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
TOMM40O96008 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC13.35□□□□□ -0.27
TOMM40O96008 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
TOMM40O96008 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
TOMM40O96008 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TOMM40O96008 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC13.35□□□□□ -0.27
TOMM40O96008 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TOMM40O96008 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC13.35□□□□□ -0.27
TOMM40O96008 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC13.35□□□□□ -0.27
TOMM40O96008 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
TOMM40O96008 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
TOMM40O96008 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TOMM40O96008 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
TOMM40O96008 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TOMM40O96008 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
TOMM40O96008 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
TOMM40O96008 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TOMM40O96008 KRT18P1-202ENST00000452408 1331 ntBASIC13.35□□□□□ -0.27
TOMM40O96008 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
TOMM40O96008 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC13.35□□□□□ -0.27
TOMM40O96008 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
TOMM40O96008 AC099063.4-201ENST00000641099 1602 ntBASIC13.35□□□□□ -0.27
TOMM40O96008 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC13.35□□□□□ -0.27
TOMM40O96008 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
TOMM40O96008 FRMD6-AS1-201ENST00000617151 2229 ntBASIC13.35□□□□□ -0.27
TOMM40O96008 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC13.35□□□□□ -0.27
TOMM40O96008 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TOMM40O96008 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC13.34□□□□□ -0.27
TOMM40O96008 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
TOMM40O96008 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TOMM40O96008 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC13.34□□□□□ -0.27
TOMM40O96008 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC13.34□□□□□ -0.27
TOMM40O96008 FRMD8P1-201ENST00000440433 1524 ntBASIC13.34□□□□□ -0.27
TOMM40O96008 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC13.34□□□□□ -0.27
TOMM40O96008 AC233702.3-201ENST00000578656 1387 ntBASIC13.34□□□□□ -0.27
TOMM40O96008 AC016734.2-201ENST00000624325 1377 ntBASIC13.34□□□□□ -0.27
TOMM40O96008 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC13.34□□□□□ -0.27
TOMM40O96008 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC13.34□□□□□ -0.27
TOMM40O96008 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
TOMM40O96008 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
TOMM40O96008 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
TOMM40O96008 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TOMM40O96008 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
TOMM40O96008 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC13.34□□□□□ -0.27
TOMM40O96008 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
TOMM40O96008 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TOMM40O96008 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
TOMM40O96008 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC13.34□□□□□ -0.27
TOMM40O96008 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC13.34□□□□□ -0.27
TOMM40O96008 TSSC2-201ENST00000450217 709 ntBASIC13.34□□□□□ -0.27
TOMM40O96008 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
TOMM40O96008 MINOS1P3-201ENST00000457048 203 ntBASIC13.34□□□□□ -0.27
TOMM40O96008 PTK2-216ENST00000519881 863 ntTSL 3 BASIC13.34□□□□□ -0.27
TOMM40O96008 AP002490.2-201ENST00000524791 560 ntBASIC13.34□□□□□ -0.27
TOMM40O96008 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC13.34□□□□□ -0.27
TOMM40O96008 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC13.34□□□□□ -0.27
TOMM40O96008 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC13.34□□□□□ -0.27
TOMM40O96008 AP005901.3-202ENST00000581653 237 ntBASIC13.34□□□□□ -0.27
TOMM40O96008 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC13.34□□□□□ -0.27
TOMM40O96008 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC13.34□□□□□ -0.27
TOMM40O96008 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
TOMM40O96008 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC13.34□□□□□ -0.27
TOMM40O96008 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC13.34□□□□□ -0.27
TOMM40O96008 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
TOMM40O96008 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
TOMM40O96008 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
TOMM40O96008 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
TOMM40O96008 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TOMM40O96008 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC13.34□□□□□ -0.27
TOMM40O96008 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
TOMM40O96008 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 56.2 ms