Protein–RNA interactions for Protein: O95900

TRUB2, Mitochondrial mRNA pseudouridine synthase TRUB2, humanhuman

Known RBP Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB2O95900 AC106730.1-201ENST00000566722 1090 ntBASIC17.78■□□□□ 0.44
TRUB2O95900 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC17.78■□□□□ 0.44
TRUB2O95900 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRUB2O95900 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC17.78■□□□□ 0.44
TRUB2O95900 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
TRUB2O95900 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
TRUB2O95900 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRUB2O95900 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRUB2O95900 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRUB2O95900 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRUB2O95900 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRUB2O95900 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
TRUB2O95900 ZNF259P1-201ENST00000407656 1365 ntBASIC17.78■□□□□ 0.44
TRUB2O95900 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC17.78■□□□□ 0.44
TRUB2O95900 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRUB2O95900 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRUB2O95900 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
TRUB2O95900 TUBB8P12-201ENST00000308911 1335 ntBASIC17.77■□□□□ 0.44
TRUB2O95900 TUBB7P-202ENST00000428444 1305 ntBASIC17.77■□□□□ 0.44
TRUB2O95900 TUBB8P7-204ENST00000567960 1332 ntBASIC17.77■□□□□ 0.44
TRUB2O95900 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
TRUB2O95900 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
TRUB2O95900 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TRUB2O95900 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TRUB2O95900 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
TRUB2O95900 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
TRUB2O95900 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TRUB2O95900 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
TRUB2O95900 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC17.77■□□□□ 0.44
TRUB2O95900 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
TRUB2O95900 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC17.77■□□□□ 0.44
TRUB2O95900 METTL26-205ENST00000397666 726 ntTSL 2 BASIC17.77■□□□□ 0.44
TRUB2O95900 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC17.77■□□□□ 0.44
TRUB2O95900 SLC25A6P2-201ENST00000497974 877 ntBASIC17.77■□□□□ 0.44
TRUB2O95900 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TRUB2O95900 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC17.77■□□□□ 0.44
TRUB2O95900 MIR4751-201ENST00000578027 74 ntBASIC17.77■□□□□ 0.44
TRUB2O95900 TCAP-202ENST00000578283 583 ntTSL 5 BASIC17.77■□□□□ 0.44
TRUB2O95900 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
TRUB2O95900 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC17.77■□□□□ 0.44
TRUB2O95900 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
TRUB2O95900 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TRUB2O95900 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TRUB2O95900 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC17.77■□□□□ 0.44
TRUB2O95900 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
TRUB2O95900 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC17.77■□□□□ 0.43
TRUB2O95900 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC17.77■□□□□ 0.43
TRUB2O95900 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC17.77■□□□□ 0.43
TRUB2O95900 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC17.77■□□□□ 0.43
TRUB2O95900 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
TRUB2O95900 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC17.77■□□□□ 0.43
TRUB2O95900 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
TRUB2O95900 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
TRUB2O95900 CA12-203ENST00000422263 2556 ntTSL 2 BASIC17.77■□□□□ 0.43
TRUB2O95900 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC17.76■□□□□ 0.43
TRUB2O95900 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TRUB2O95900 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRUB2O95900 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC17.76■□□□□ 0.43
TRUB2O95900 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC17.76■□□□□ 0.43
TRUB2O95900 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TRUB2O95900 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRUB2O95900 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRUB2O95900 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRUB2O95900 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
TRUB2O95900 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC17.76■□□□□ 0.43
TRUB2O95900 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRUB2O95900 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC17.76■□□□□ 0.43
TRUB2O95900 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC17.76■□□□□ 0.43
TRUB2O95900 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC17.76■□□□□ 0.43
TRUB2O95900 AP000347.1-202ENST00000435868 847 ntBASIC17.76■□□□□ 0.43
TRUB2O95900 PRSS29P-201ENST00000440800 595 ntBASIC17.76■□□□□ 0.43
TRUB2O95900 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC17.76■□□□□ 0.43
TRUB2O95900 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC17.76■□□□□ 0.43
TRUB2O95900 OR7E47P-204ENST00000575924 449 ntBASIC17.76■□□□□ 0.43
TRUB2O95900 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC17.76■□□□□ 0.43
TRUB2O95900 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC17.76■□□□□ 0.43
TRUB2O95900 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC17.76■□□□□ 0.43
TRUB2O95900 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC17.76■□□□□ 0.43
TRUB2O95900 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC17.76■□□□□ 0.43
TRUB2O95900 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC17.76■□□□□ 0.43
TRUB2O95900 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC17.76■□□□□ 0.43
TRUB2O95900 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
TRUB2O95900 AC002310.6-201ENST00000624451 1377 ntBASIC17.76■□□□□ 0.43
TRUB2O95900 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TRUB2O95900 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC17.76■□□□□ 0.43
TRUB2O95900 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC17.76■□□□□ 0.43
TRUB2O95900 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRUB2O95900 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
TRUB2O95900 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TRUB2O95900 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRUB2O95900 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRUB2O95900 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC17.75■□□□□ 0.43
TRUB2O95900 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TRUB2O95900 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRUB2O95900 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
TRUB2O95900 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TRUB2O95900 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TRUB2O95900 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRUB2O95900 LBH-204ENST00000406087 559 ntTSL 4 BASIC17.75■□□□□ 0.43
TRUB2O95900 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms