Protein–RNA interactions for Protein: O94822

LTN1, E3 ubiquitin-protein ligase listerin, humanhuman

Predictions only

Length 1,766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1O94822 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC22.18■■□□□ 1.14
LTN1O94822 AC004233.3-201ENST00000607794 1269 ntBASIC22.18■■□□□ 1.14
LTN1O94822 SPTSSB-204ENST00000617024 1292 ntBASIC22.18■■□□□ 1.14
LTN1O94822 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
LTN1O94822 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
LTN1O94822 AC092053.1-201ENST00000605787 1936 ntBASIC22.18■■□□□ 1.14
LTN1O94822 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
LTN1O94822 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
LTN1O94822 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
LTN1O94822 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC22.17■■□□□ 1.14
LTN1O94822 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC22.17■■□□□ 1.14
LTN1O94822 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC22.17■■□□□ 1.14
LTN1O94822 ARL16-202ENST00000570561 768 ntTSL 2 BASIC22.17■■□□□ 1.14
LTN1O94822 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC22.17■■□□□ 1.14
LTN1O94822 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
LTN1O94822 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
LTN1O94822 CD276-203ENST00000537340 2439 ntTSL 2 BASIC22.17■■□□□ 1.14
LTN1O94822 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
LTN1O94822 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
LTN1O94822 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC22.17■■□□□ 1.14
LTN1O94822 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
LTN1O94822 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
LTN1O94822 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC22.17■■□□□ 1.14
LTN1O94822 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
LTN1O94822 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
LTN1O94822 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC22.17■■□□□ 1.14
LTN1O94822 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
LTN1O94822 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
LTN1O94822 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
LTN1O94822 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
LTN1O94822 API5-211ENST00000534695 560 ntTSL 5 BASIC22.17■■□□□ 1.14
LTN1O94822 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
LTN1O94822 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC22.17■■□□□ 1.14
LTN1O94822 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC22.17■■□□□ 1.14
LTN1O94822 RN7SL828P-201ENST00000607615 303 ntBASIC22.17■■□□□ 1.14
LTN1O94822 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC22.17■■□□□ 1.14
LTN1O94822 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC22.17■■□□□ 1.14
LTN1O94822 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
LTN1O94822 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC22.17■■□□□ 1.14
LTN1O94822 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC22.17■■□□□ 1.14
LTN1O94822 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
LTN1O94822 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC22.16■■□□□ 1.14
LTN1O94822 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
LTN1O94822 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
LTN1O94822 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
LTN1O94822 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC22.16■■□□□ 1.14
LTN1O94822 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC22.16■■□□□ 1.14
LTN1O94822 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC22.16■■□□□ 1.14
LTN1O94822 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
LTN1O94822 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC22.16■■□□□ 1.14
LTN1O94822 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC22.16■■□□□ 1.14
LTN1O94822 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
LTN1O94822 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC22.16■■□□□ 1.14
LTN1O94822 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC22.16■■□□□ 1.14
LTN1O94822 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC22.15■■□□□ 1.14
LTN1O94822 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
LTN1O94822 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
LTN1O94822 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
LTN1O94822 DPM2-202ENST00000373110 738 ntTSL 2 BASIC22.15■■□□□ 1.14
LTN1O94822 RBM39-205ENST00000397370 612 ntTSL 2 BASIC22.15■■□□□ 1.14
LTN1O94822 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC22.15■■□□□ 1.14
LTN1O94822 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC22.15■■□□□ 1.14
LTN1O94822 AC093724.1-201ENST00000448659 1027 ntBASIC22.15■■□□□ 1.14
LTN1O94822 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC22.15■■□□□ 1.14
LTN1O94822 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC22.15■■□□□ 1.14
LTN1O94822 AL079307.3-201ENST00000556114 283 ntBASIC22.15■■□□□ 1.14
LTN1O94822 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC22.15■■□□□ 1.14
LTN1O94822 AC061975.2-201ENST00000581722 295 ntBASIC22.15■■□□□ 1.14
LTN1O94822 AL358472.5-202ENST00000641448 1267 ntBASIC22.15■■□□□ 1.14
LTN1O94822 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC22.15■■□□□ 1.14
LTN1O94822 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
LTN1O94822 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
LTN1O94822 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
LTN1O94822 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
LTN1O94822 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC22.15■■□□□ 1.14
LTN1O94822 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC22.15■■□□□ 1.14
LTN1O94822 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
LTN1O94822 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC22.15■■□□□ 1.14
LTN1O94822 NOC2LP2-201ENST00000407594 1944 ntBASIC22.15■■□□□ 1.14
LTN1O94822 AL035456.1-201ENST00000456064 1369 ntBASIC22.15■■□□□ 1.14
LTN1O94822 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC22.15■■□□□ 1.14
LTN1O94822 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC22.15■■□□□ 1.14
LTN1O94822 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC22.15■■□□□ 1.14
LTN1O94822 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC22.15■■□□□ 1.14
LTN1O94822 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC22.15■■□□□ 1.14
LTN1O94822 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
LTN1O94822 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC22.14■■□□□ 1.14
LTN1O94822 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC22.14■■□□□ 1.14
LTN1O94822 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
LTN1O94822 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC22.14■■□□□ 1.14
LTN1O94822 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC22.14■■□□□ 1.14
LTN1O94822 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
LTN1O94822 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
LTN1O94822 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC22.14■■□□□ 1.13
LTN1O94822 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
LTN1O94822 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
LTN1O94822 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC22.14■■□□□ 1.13
LTN1O94822 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC22.14■■□□□ 1.13
LTN1O94822 AC027307.3-201ENST00000594262 1100 ntBASIC22.14■■□□□ 1.13
LTN1O94822 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC22.14■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms