Protein–RNA interactions for Protein: O76039

CDKL5, Cyclin-dependent kinase-like 5, humanhuman

Predictions only

Length 1,030 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5O76039 AC105339.3-201ENST00000560043 636 ntBASIC19.73■□□□□ 0.75
CDKL5O76039 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC19.73■□□□□ 0.75
CDKL5O76039 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC19.73■□□□□ 0.75
CDKL5O76039 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CDKL5O76039 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC19.73■□□□□ 0.75
CDKL5O76039 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
CDKL5O76039 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC19.73■□□□□ 0.75
CDKL5O76039 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC19.73■□□□□ 0.75
CDKL5O76039 AL645728.1-201ENST00000366221 2101 ntBASIC19.73■□□□□ 0.75
CDKL5O76039 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
CDKL5O76039 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CDKL5O76039 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CDKL5O76039 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC19.73■□□□□ 0.75
CDKL5O76039 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
CDKL5O76039 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CDKL5O76039 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CDKL5O76039 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CDKL5O76039 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC19.73■□□□□ 0.75
CDKL5O76039 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CDKL5O76039 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
CDKL5O76039 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CDKL5O76039 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CDKL5O76039 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
CDKL5O76039 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CDKL5O76039 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC19.72■□□□□ 0.75
CDKL5O76039 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CDKL5O76039 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CDKL5O76039 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
CDKL5O76039 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CDKL5O76039 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
CDKL5O76039 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CDKL5O76039 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
CDKL5O76039 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CDKL5O76039 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
CDKL5O76039 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
CDKL5O76039 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC19.72■□□□□ 0.75
CDKL5O76039 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC19.72■□□□□ 0.75
CDKL5O76039 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC19.72■□□□□ 0.75
CDKL5O76039 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC19.72■□□□□ 0.75
CDKL5O76039 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC19.72■□□□□ 0.75
CDKL5O76039 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
CDKL5O76039 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC19.72■□□□□ 0.75
CDKL5O76039 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC19.72■□□□□ 0.75
CDKL5O76039 CALM3-211ENST00000598871 561 ntTSL 4 BASIC19.72■□□□□ 0.75
CDKL5O76039 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CDKL5O76039 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CDKL5O76039 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CDKL5O76039 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC19.72■□□□□ 0.75
CDKL5O76039 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CDKL5O76039 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CDKL5O76039 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CDKL5O76039 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CDKL5O76039 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
CDKL5O76039 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
CDKL5O76039 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
CDKL5O76039 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CDKL5O76039 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC19.72■□□□□ 0.75
CDKL5O76039 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CDKL5O76039 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC19.72■□□□□ 0.75
CDKL5O76039 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CDKL5O76039 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC19.71■□□□□ 0.75
CDKL5O76039 AC002310.6-201ENST00000624451 1377 ntBASIC19.71■□□□□ 0.75
CDKL5O76039 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
CDKL5O76039 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
CDKL5O76039 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CDKL5O76039 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC19.71■□□□□ 0.75
CDKL5O76039 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC19.71■□□□□ 0.75
CDKL5O76039 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC19.71■□□□□ 0.75
CDKL5O76039 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CDKL5O76039 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CDKL5O76039 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC19.71■□□□□ 0.75
CDKL5O76039 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC19.71■□□□□ 0.75
CDKL5O76039 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC19.71■□□□□ 0.75
CDKL5O76039 HNRNPDP1-201ENST00000439535 754 ntBASIC19.71■□□□□ 0.75
CDKL5O76039 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC19.71■□□□□ 0.75
CDKL5O76039 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC19.71■□□□□ 0.75
CDKL5O76039 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC19.71■□□□□ 0.75
CDKL5O76039 PP7080-204ENST00000510714 601 ntTSL 3 BASIC19.71■□□□□ 0.75
CDKL5O76039 RPS29-206ENST00000557111 488 ntTSL 2 BASIC19.71■□□□□ 0.75
CDKL5O76039 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
CDKL5O76039 AL356488.2-201ENST00000602755 427 ntBASIC19.71■□□□□ 0.75
CDKL5O76039 AC013467.2-201ENST00000605472 835 ntBASIC19.71■□□□□ 0.75
CDKL5O76039 AC008667.4-201ENST00000607370 168 ntBASIC19.71■□□□□ 0.75
CDKL5O76039 AL031008.1-201ENST00000619963 541 ntBASIC19.71■□□□□ 0.75
CDKL5O76039 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC19.71■□□□□ 0.75
CDKL5O76039 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
CDKL5O76039 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
CDKL5O76039 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC19.71■□□□□ 0.75
CDKL5O76039 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
CDKL5O76039 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC19.71■□□□□ 0.75
CDKL5O76039 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
CDKL5O76039 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC19.71■□□□□ 0.75
CDKL5O76039 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CDKL5O76039 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CDKL5O76039 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CDKL5O76039 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
CDKL5O76039 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC19.71■□□□□ 0.75
CDKL5O76039 AC084018.2-201ENST00000613093 2607 ntBASIC19.71■□□□□ 0.75
CDKL5O76039 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
CDKL5O76039 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 73.7 ms