Protein–RNA interactions for Protein: O60925

PFDN1, Prefoldin subunit 1, humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1O60925 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
PFDN1O60925 RCAN3-207ENST00000538532 2640 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PFDN1O60925 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC15.16■□□□□ 0.02
PFDN1O60925 AC005912.2-201ENST00000619492 2400 ntBASIC15.16■□□□□ 0.02
PFDN1O60925 GOLGA6L3-201ENST00000507199 1679 ntBASIC15.16■□□□□ 0.02
PFDN1O60925 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PFDN1O60925 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC15.16■□□□□ 0.02
PFDN1O60925 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC15.16■□□□□ 0.02
PFDN1O60925 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC15.16■□□□□ 0.02
PFDN1O60925 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC15.16■□□□□ 0.02
PFDN1O60925 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PFDN1O60925 OS9-207ENST00000439210 1946 ntTSL 2 BASIC15.16■□□□□ 0.02
PFDN1O60925 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC15.16■□□□□ 0.02
PFDN1O60925 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC15.16■□□□□ 0.02
PFDN1O60925 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC15.16■□□□□ 0.02
PFDN1O60925 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
PFDN1O60925 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
PFDN1O60925 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC15.16■□□□□ 0.02
PFDN1O60925 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
PFDN1O60925 PPP6R2-204ENST00000395744 3293 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
PFDN1O60925 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
PFDN1O60925 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC15.16■□□□□ 0.02
PFDN1O60925 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC15.16■□□□□ 0.02
PFDN1O60925 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PFDN1O60925 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
PFDN1O60925 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PFDN1O60925 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC15.16■□□□□ 0.02
PFDN1O60925 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PFDN1O60925 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC15.16■□□□□ 0.02
PFDN1O60925 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PFDN1O60925 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC15.16■□□□□ 0.02
PFDN1O60925 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC15.16■□□□□ 0.02
PFDN1O60925 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
PFDN1O60925 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
PFDN1O60925 SMARCA4-202ENST00000413806 5512 ntTSL 5 BASIC15.16■□□□□ 0.02
PFDN1O60925 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC15.16■□□□□ 0.02
PFDN1O60925 KIAA1161-201ENST00000297625 6398 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PFDN1O60925 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
PFDN1O60925 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
PFDN1O60925 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
PFDN1O60925 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC15.16■□□□□ 0.02
PFDN1O60925 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PFDN1O60925 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC15.15■□□□□ 0.02
PFDN1O60925 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PFDN1O60925 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC15.15■□□□□ 0.02
PFDN1O60925 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
PFDN1O60925 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC15.15■□□□□ 0.02
PFDN1O60925 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PFDN1O60925 ACIN1-201ENST00000262710 4935 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
PFDN1O60925 FEM1A-201ENST00000269856 9593 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
PFDN1O60925 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PFDN1O60925 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PFDN1O60925 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
PFDN1O60925 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC15.15■□□□□ 0.02
PFDN1O60925 GNAO1-214ENST00000638705 3529 ntAPPRIS P5 TSL 1 (best) BASIC15.15■□□□□ 0.02
PFDN1O60925 VPS26B-201ENST00000281187 3691 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PFDN1O60925 AMT-206ENST00000458307 1860 ntTSL 2 BASIC15.15■□□□□ 0.02
PFDN1O60925 LINC01101-201ENST00000622953 1884 ntBASIC15.15■□□□□ 0.02
PFDN1O60925 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
PFDN1O60925 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
PFDN1O60925 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PFDN1O60925 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
PFDN1O60925 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC15.15■□□□□ 0.02
PFDN1O60925 RPP21-222ENST00000433076 577 ntTSL 2 BASIC15.15■□□□□ 0.02
PFDN1O60925 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PFDN1O60925 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC15.15■□□□□ 0.02
PFDN1O60925 CFL2-205ENST00000555765 632 ntTSL 2 BASIC15.15■□□□□ 0.02
PFDN1O60925 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
PFDN1O60925 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC15.15■□□□□ 0.02
PFDN1O60925 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PFDN1O60925 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PFDN1O60925 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PFDN1O60925 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
PFDN1O60925 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PFDN1O60925 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC15.15■□□□□ 0.02
PFDN1O60925 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
PFDN1O60925 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PFDN1O60925 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
PFDN1O60925 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PFDN1O60925 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC15.14■□□□□ 0.01
PFDN1O60925 GNB1L-201ENST00000329517 6706 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PFDN1O60925 TMPRSS6-201ENST00000346753 3197 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
PFDN1O60925 NR3C1-201ENST00000231509 3556 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PFDN1O60925 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC15.14■□□□□ 0.01
PFDN1O60925 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PFDN1O60925 STRC-205ENST00000450892 5680 ntAPPRIS P2 TSL 5 BASIC15.14■□□□□ 0.01
PFDN1O60925 SPPL2A-201ENST00000261854 7372 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PFDN1O60925 FRMD8-201ENST00000317568 3723 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PFDN1O60925 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
PFDN1O60925 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
PFDN1O60925 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC15.14■□□□□ 0.01
PFDN1O60925 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
PFDN1O60925 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC15.14■□□□□ 0.01
PFDN1O60925 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC15.14■□□□□ 0.01
PFDN1O60925 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC15.14■□□□□ 0.01
PFDN1O60925 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
PFDN1O60925 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
PFDN1O60925 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PFDN1O60925 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC15.14■□□□□ 0.01
PFDN1O60925 AC099791.1-201ENST00000416440 715 ntBASIC15.14■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 82.3 ms