Protein–RNA interactions for Protein: O60494

CUBN, Cubilin, humanhuman

Predictions only

Length 3,623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUBNO60494 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CUBNO60494 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CUBNO60494 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
CUBNO60494 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CUBNO60494 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CUBNO60494 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CUBNO60494 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CUBNO60494 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC13.41□□□□□ -0.26
CUBNO60494 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
CUBNO60494 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CUBNO60494 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC13.41□□□□□ -0.26
CUBNO60494 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
CUBNO60494 BTBD7P1-201ENST00000447253 1453 ntBASIC13.41□□□□□ -0.26
CUBNO60494 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC13.41□□□□□ -0.26
CUBNO60494 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CUBNO60494 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC13.41□□□□□ -0.26
CUBNO60494 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CUBNO60494 AC087499.5-201ENST00000452760 1342 ntBASIC13.41□□□□□ -0.26
CUBNO60494 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CUBNO60494 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
CUBNO60494 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC13.41□□□□□ -0.26
CUBNO60494 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CUBNO60494 MADD-208ENST00000405573 1823 ntTSL 5 BASIC13.41□□□□□ -0.26
CUBNO60494 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC13.41□□□□□ -0.26
CUBNO60494 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC13.41□□□□□ -0.26
CUBNO60494 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC13.41□□□□□ -0.26
CUBNO60494 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CUBNO60494 AL512343.1-201ENST00000605837 169 ntBASIC13.41□□□□□ -0.26
CUBNO60494 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
CUBNO60494 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC13.41□□□□□ -0.26
CUBNO60494 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CUBNO60494 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CUBNO60494 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
CUBNO60494 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
CUBNO60494 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CUBNO60494 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC13.41□□□□□ -0.26
CUBNO60494 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
CUBNO60494 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
CUBNO60494 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
CUBNO60494 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CUBNO60494 MIR1908-201ENST00000410394 80 ntBASIC13.41□□□□□ -0.26
CUBNO60494 AL080243.2-201ENST00000418783 582 ntBASIC13.41□□□□□ -0.26
CUBNO60494 AL355994.2-201ENST00000447882 704 ntBASIC13.41□□□□□ -0.26
CUBNO60494 IGHV3-52-201ENST00000519770 353 ntBASIC13.41□□□□□ -0.26
CUBNO60494 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC13.41□□□□□ -0.26
CUBNO60494 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
CUBNO60494 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC13.41□□□□□ -0.26
CUBNO60494 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CUBNO60494 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC13.41□□□□□ -0.26
CUBNO60494 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
CUBNO60494 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC13.41□□□□□ -0.26
CUBNO60494 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CUBNO60494 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
CUBNO60494 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CUBNO60494 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CUBNO60494 HLA-V-204ENST00000476601 1289 ntBASIC13.4□□□□□ -0.26
CUBNO60494 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CUBNO60494 LGALS9C-215ENST00000584941 1104 ntTSL 5 BASIC13.4□□□□□ -0.26
CUBNO60494 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CUBNO60494 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC13.4□□□□□ -0.26
CUBNO60494 AC073592.8-201ENST00000624126 511 ntBASIC13.4□□□□□ -0.26
CUBNO60494 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC13.4□□□□□ -0.26
CUBNO60494 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
CUBNO60494 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
CUBNO60494 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CUBNO60494 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
CUBNO60494 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC13.4□□□□□ -0.26
CUBNO60494 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CUBNO60494 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC13.4□□□□□ -0.26
CUBNO60494 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CUBNO60494 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC13.4□□□□□ -0.26
CUBNO60494 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC13.4□□□□□ -0.26
CUBNO60494 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
CUBNO60494 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CUBNO60494 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
CUBNO60494 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CUBNO60494 DFFBP1-201ENST00000433250 979 ntBASIC13.4□□□□□ -0.26
CUBNO60494 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC13.4□□□□□ -0.26
CUBNO60494 AC105233.2-201ENST00000523697 349 ntBASIC13.4□□□□□ -0.26
CUBNO60494 CD74-212ENST00000524315 584 ntTSL 5 BASIC13.4□□□□□ -0.26
CUBNO60494 AF228730.5-201ENST00000530288 346 ntBASIC13.4□□□□□ -0.26
CUBNO60494 AC073439.1-201ENST00000624121 1774 ntBASIC13.4□□□□□ -0.26
CUBNO60494 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC13.4□□□□□ -0.26
CUBNO60494 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
CUBNO60494 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CUBNO60494 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
CUBNO60494 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CUBNO60494 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CUBNO60494 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
CUBNO60494 RPL37AP1-201ENST00000412502 279 ntBASIC13.4□□□□□ -0.26
CUBNO60494 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC13.4□□□□□ -0.26
CUBNO60494 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC13.4□□□□□ -0.26
CUBNO60494 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC13.4□□□□□ -0.26
CUBNO60494 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC13.4□□□□□ -0.26
CUBNO60494 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC13.4□□□□□ -0.26
CUBNO60494 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
CUBNO60494 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
CUBNO60494 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC13.4□□□□□ -0.27
CUBNO60494 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC13.4□□□□□ -0.27
CUBNO60494 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC13.4□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms