Protein–RNA interactions for Protein: O60264

SMARCA5, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5, humanhuman

Predicted RBP Predictions only

Length 1,052 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5O60264 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC20.93■□□□□ 0.94
SMARCA5O60264 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
SMARCA5O60264 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
SMARCA5O60264 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
SMARCA5O60264 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
SMARCA5O60264 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC20.93■□□□□ 0.94
SMARCA5O60264 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC20.93■□□□□ 0.94
SMARCA5O60264 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SMARCA5O60264 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
SMARCA5O60264 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC20.93■□□□□ 0.94
SMARCA5O60264 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
SMARCA5O60264 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SMARCA5O60264 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
SMARCA5O60264 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
SMARCA5O60264 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC20.93■□□□□ 0.94
SMARCA5O60264 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC20.93■□□□□ 0.94
SMARCA5O60264 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC20.93■□□□□ 0.94
SMARCA5O60264 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
SMARCA5O60264 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC20.93■□□□□ 0.94
SMARCA5O60264 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SMARCA5O60264 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SMARCA5O60264 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC20.93■□□□□ 0.94
SMARCA5O60264 AC005593.1-201ENST00000624894 515 ntBASIC20.93■□□□□ 0.94
SMARCA5O60264 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC20.93■□□□□ 0.94
SMARCA5O60264 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
SMARCA5O60264 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
SMARCA5O60264 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
SMARCA5O60264 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC20.93■□□□□ 0.94
SMARCA5O60264 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC20.93■□□□□ 0.94
SMARCA5O60264 KRT8P49-201ENST00000604166 1432 ntBASIC20.93■□□□□ 0.94
SMARCA5O60264 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
SMARCA5O60264 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SMARCA5O60264 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
SMARCA5O60264 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SMARCA5O60264 AL391256.1-201ENST00000443260 1855 ntBASIC20.92■□□□□ 0.94
SMARCA5O60264 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC20.92■□□□□ 0.94
SMARCA5O60264 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC20.92■□□□□ 0.94
SMARCA5O60264 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC20.92■□□□□ 0.94
SMARCA5O60264 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC20.92■□□□□ 0.94
SMARCA5O60264 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC20.92■□□□□ 0.94
SMARCA5O60264 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SMARCA5O60264 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SMARCA5O60264 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SMARCA5O60264 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SMARCA5O60264 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SMARCA5O60264 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
SMARCA5O60264 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC20.92■□□□□ 0.94
SMARCA5O60264 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC20.92■□□□□ 0.94
SMARCA5O60264 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
SMARCA5O60264 IGHV3-22-201ENST00000520721 359 ntBASIC20.92■□□□□ 0.94
SMARCA5O60264 UNC93B6-202ENST00000528242 690 ntBASIC20.92■□□□□ 0.94
SMARCA5O60264 CBFB-203ENST00000561924 584 ntTSL 5 BASIC20.92■□□□□ 0.94
SMARCA5O60264 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC20.92■□□□□ 0.94
SMARCA5O60264 AF228730.7-201ENST00000641842 219 ntBASIC20.92■□□□□ 0.94
SMARCA5O60264 OR6D1P-202ENST00000641007 5290 ntBASIC20.92■□□□□ 0.94
SMARCA5O60264 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
SMARCA5O60264 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
SMARCA5O60264 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SMARCA5O60264 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC20.92■□□□□ 0.94
SMARCA5O60264 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC20.92■□□□□ 0.94
SMARCA5O60264 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SMARCA5O60264 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
SMARCA5O60264 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC20.92■□□□□ 0.94
SMARCA5O60264 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC20.92■□□□□ 0.94
SMARCA5O60264 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
SMARCA5O60264 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SMARCA5O60264 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SMARCA5O60264 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SMARCA5O60264 TUBB8P12-201ENST00000308911 1335 ntBASIC20.91■□□□□ 0.94
SMARCA5O60264 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.91■□□□□ 0.94
SMARCA5O60264 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
SMARCA5O60264 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
SMARCA5O60264 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC20.91■□□□□ 0.94
SMARCA5O60264 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC20.91■□□□□ 0.94
SMARCA5O60264 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
SMARCA5O60264 TUBB7P-202ENST00000428444 1305 ntBASIC20.91■□□□□ 0.94
SMARCA5O60264 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC20.91■□□□□ 0.94
SMARCA5O60264 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC20.91■□□□□ 0.94
SMARCA5O60264 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
SMARCA5O60264 RNA5SP415-201ENST00000517246 115 ntBASIC20.91■□□□□ 0.94
SMARCA5O60264 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC20.91■□□□□ 0.94
SMARCA5O60264 TUBB8P7-204ENST00000567960 1332 ntBASIC20.91■□□□□ 0.94
SMARCA5O60264 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
SMARCA5O60264 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
SMARCA5O60264 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC20.91■□□□□ 0.94
SMARCA5O60264 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC20.91■□□□□ 0.94
SMARCA5O60264 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC20.91■□□□□ 0.94
SMARCA5O60264 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC20.91■□□□□ 0.94
SMARCA5O60264 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
SMARCA5O60264 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
SMARCA5O60264 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SMARCA5O60264 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC20.91■□□□□ 0.94
SMARCA5O60264 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC20.9■□□□□ 0.94
SMARCA5O60264 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SMARCA5O60264 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC20.9■□□□□ 0.94
SMARCA5O60264 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC20.9■□□□□ 0.94
SMARCA5O60264 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC20.9■□□□□ 0.94
SMARCA5O60264 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC20.9■□□□□ 0.94
SMARCA5O60264 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SMARCA5O60264 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC20.9■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms