Protein–RNA interactions for Protein: A6NGU7

LINC01546, Putative uncharacterized protein encoded by LINC01546, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01546A6NGU7 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
LINC01546A6NGU7 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
LINC01546A6NGU7 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
LINC01546A6NGU7 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
LINC01546A6NGU7 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
LINC01546A6NGU7 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
LINC01546A6NGU7 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
LINC01546A6NGU7 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC11.98□□□□□ -0.49
LINC01546A6NGU7 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
LINC01546A6NGU7 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
LINC01546A6NGU7 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
LINC01546A6NGU7 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
LINC01546A6NGU7 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC11.97□□□□□ -0.49
LINC01546A6NGU7 AC020658.6-201ENST00000623564 1870 ntBASIC11.97□□□□□ -0.49
LINC01546A6NGU7 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
LINC01546A6NGU7 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC11.97□□□□□ -0.49
LINC01546A6NGU7 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
LINC01546A6NGU7 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC11.97□□□□□ -0.49
LINC01546A6NGU7 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC11.97□□□□□ -0.49
LINC01546A6NGU7 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
LINC01546A6NGU7 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
LINC01546A6NGU7 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
LINC01546A6NGU7 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
LINC01546A6NGU7 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC11.97□□□□□ -0.49
LINC01546A6NGU7 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
LINC01546A6NGU7 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
LINC01546A6NGU7 AL353593.2-201ENST00000602529 1483 ntBASIC11.97□□□□□ -0.49
LINC01546A6NGU7 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
LINC01546A6NGU7 KRT8P10-201ENST00000450021 1447 ntBASIC11.97□□□□□ -0.49
LINC01546A6NGU7 KRT8P49-201ENST00000604166 1432 ntBASIC11.97□□□□□ -0.49
LINC01546A6NGU7 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
LINC01546A6NGU7 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
LINC01546A6NGU7 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
LINC01546A6NGU7 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
LINC01546A6NGU7 RPS2P55-201ENST00000397318 883 ntBASIC11.97□□□□□ -0.49
LINC01546A6NGU7 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC11.97□□□□□ -0.49
LINC01546A6NGU7 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC11.97□□□□□ -0.49
LINC01546A6NGU7 POU5F1P6-201ENST00000466990 990 ntBASIC11.97□□□□□ -0.49
LINC01546A6NGU7 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC11.97□□□□□ -0.49
LINC01546A6NGU7 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC11.97□□□□□ -0.49
LINC01546A6NGU7 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC11.97□□□□□ -0.49
LINC01546A6NGU7 KLF13-207ENST00000560473 489 ntTSL 3 BASIC11.97□□□□□ -0.49
LINC01546A6NGU7 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC11.97□□□□□ -0.49
LINC01546A6NGU7 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC11.97□□□□□ -0.49
LINC01546A6NGU7 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC11.97□□□□□ -0.49
LINC01546A6NGU7 AC104771.1-201ENST00000603335 964 ntBASIC11.97□□□□□ -0.49
LINC01546A6NGU7 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC11.97□□□□□ -0.49
LINC01546A6NGU7 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC11.97□□□□□ -0.49
LINC01546A6NGU7 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
LINC01546A6NGU7 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC11.97□□□□□ -0.49
LINC01546A6NGU7 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC11.97□□□□□ -0.49
LINC01546A6NGU7 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC11.97□□□□□ -0.49
LINC01546A6NGU7 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC11.97□□□□□ -0.49
LINC01546A6NGU7 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
LINC01546A6NGU7 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
LINC01546A6NGU7 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
LINC01546A6NGU7 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
LINC01546A6NGU7 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
LINC01546A6NGU7 CROCCP1-201ENST00000426910 5675 ntBASIC11.97□□□□□ -0.49
LINC01546A6NGU7 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
LINC01546A6NGU7 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
LINC01546A6NGU7 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
LINC01546A6NGU7 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
LINC01546A6NGU7 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC11.97□□□□□ -0.49
LINC01546A6NGU7 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC11.97□□□□□ -0.49
LINC01546A6NGU7 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC11.96□□□□□ -0.49
LINC01546A6NGU7 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
LINC01546A6NGU7 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
LINC01546A6NGU7 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
LINC01546A6NGU7 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC11.96□□□□□ -0.49
LINC01546A6NGU7 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC11.96□□□□□ -0.49
LINC01546A6NGU7 FOS-208ENST00000555686 1496 ntTSL 2 BASIC11.96□□□□□ -0.49
LINC01546A6NGU7 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
LINC01546A6NGU7 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
LINC01546A6NGU7 DKFZP434H168-201ENST00000567381 1905 ntBASIC11.96□□□□□ -0.49
LINC01546A6NGU7 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
LINC01546A6NGU7 LINC01101-201ENST00000622953 1884 ntBASIC11.96□□□□□ -0.49
LINC01546A6NGU7 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC11.96□□□□□ -0.49
LINC01546A6NGU7 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC11.96□□□□□ -0.49
LINC01546A6NGU7 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
LINC01546A6NGU7 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
LINC01546A6NGU7 MIR648-201ENST00000385046 94 ntBASIC11.96□□□□□ -0.49
LINC01546A6NGU7 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
LINC01546A6NGU7 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC11.96□□□□□ -0.49
LINC01546A6NGU7 ECEL1P2-202ENST00000465689 757 ntBASIC11.96□□□□□ -0.49
LINC01546A6NGU7 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC11.96□□□□□ -0.49
LINC01546A6NGU7 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC11.96□□□□□ -0.49
LINC01546A6NGU7 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC11.96□□□□□ -0.49
LINC01546A6NGU7 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
LINC01546A6NGU7 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
LINC01546A6NGU7 VPS72-207ENST00000640458 689 ntTSL 5 BASIC11.96□□□□□ -0.49
LINC01546A6NGU7 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
LINC01546A6NGU7 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
LINC01546A6NGU7 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.5
LINC01546A6NGU7 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
LINC01546A6NGU7 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
LINC01546A6NGU7 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
LINC01546A6NGU7 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
LINC01546A6NGU7 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
LINC01546A6NGU7 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms