Protein–RNA interactions for Protein: A6NER0

TBC1D3F, TBC1 domain family member 3F, humanhuman

Predicted RBP Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3FA6NER0 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TBC1D3FA6NER0 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TBC1D3FA6NER0 HCG4-201ENST00000418983 998 ntBASIC16.86■□□□□ 0.29
TBC1D3FA6NER0 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC16.86■□□□□ 0.29
TBC1D3FA6NER0 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TBC1D3FA6NER0 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
TBC1D3FA6NER0 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
TBC1D3FA6NER0 RN7SL589P-201ENST00000481268 310 ntBASIC16.86■□□□□ 0.29
TBC1D3FA6NER0 HLA-J-203ENST00000494367 1087 ntBASIC16.86■□□□□ 0.29
TBC1D3FA6NER0 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC16.86■□□□□ 0.29
TBC1D3FA6NER0 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TBC1D3FA6NER0 DUX4L17-201ENST00000557360 1267 ntBASIC16.86■□□□□ 0.29
TBC1D3FA6NER0 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC16.86■□□□□ 0.29
TBC1D3FA6NER0 RARRES2P8-201ENST00000566335 367 ntBASIC16.86■□□□□ 0.29
TBC1D3FA6NER0 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC16.86■□□□□ 0.29
TBC1D3FA6NER0 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC16.86■□□□□ 0.29
TBC1D3FA6NER0 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC16.86■□□□□ 0.29
TBC1D3FA6NER0 WT1-AS_2.1-201ENST00000613208 137 ntBASIC16.86■□□□□ 0.29
TBC1D3FA6NER0 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC16.86■□□□□ 0.29
TBC1D3FA6NER0 LINC00628-201ENST00000628516 1289 ntBASIC16.86■□□□□ 0.29
TBC1D3FA6NER0 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
TBC1D3FA6NER0 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TBC1D3FA6NER0 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TBC1D3FA6NER0 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC16.86■□□□□ 0.29
TBC1D3FA6NER0 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
TBC1D3FA6NER0 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
TBC1D3FA6NER0 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
TBC1D3FA6NER0 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
TBC1D3FA6NER0 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
TBC1D3FA6NER0 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC16.86■□□□□ 0.29
TBC1D3FA6NER0 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TBC1D3FA6NER0 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TBC1D3FA6NER0 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC16.86■□□□□ 0.29
TBC1D3FA6NER0 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TBC1D3FA6NER0 AR-207ENST00000612010 3896 ntTSL 5 BASIC16.86■□□□□ 0.29
TBC1D3FA6NER0 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TBC1D3FA6NER0 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC16.85■□□□□ 0.29
TBC1D3FA6NER0 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TBC1D3FA6NER0 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TBC1D3FA6NER0 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
TBC1D3FA6NER0 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC16.85■□□□□ 0.29
TBC1D3FA6NER0 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TBC1D3FA6NER0 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TBC1D3FA6NER0 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TBC1D3FA6NER0 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
TBC1D3FA6NER0 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TBC1D3FA6NER0 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
TBC1D3FA6NER0 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TBC1D3FA6NER0 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC16.85■□□□□ 0.29
TBC1D3FA6NER0 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC16.85■□□□□ 0.29
TBC1D3FA6NER0 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TBC1D3FA6NER0 AC079140.1-201ENST00000508039 487 ntBASIC16.85■□□□□ 0.29
TBC1D3FA6NER0 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC16.85■□□□□ 0.29
TBC1D3FA6NER0 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC16.85■□□□□ 0.29
TBC1D3FA6NER0 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC16.85■□□□□ 0.29
TBC1D3FA6NER0 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
TBC1D3FA6NER0 AL135744.1-201ENST00000565098 629 ntBASIC16.85■□□□□ 0.29
TBC1D3FA6NER0 AL009183.1-201ENST00000603760 355 ntBASIC16.85■□□□□ 0.29
TBC1D3FA6NER0 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TBC1D3FA6NER0 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
TBC1D3FA6NER0 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC16.85■□□□□ 0.29
TBC1D3FA6NER0 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
TBC1D3FA6NER0 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
TBC1D3FA6NER0 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC16.85■□□□□ 0.29
TBC1D3FA6NER0 LETM1P2-201ENST00000597330 2178 ntBASIC16.85■□□□□ 0.29
TBC1D3FA6NER0 FOS-208ENST00000555686 1496 ntTSL 2 BASIC16.85■□□□□ 0.29
TBC1D3FA6NER0 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC16.85■□□□□ 0.29
TBC1D3FA6NER0 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
TBC1D3FA6NER0 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TBC1D3FA6NER0 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC16.85■□□□□ 0.29
TBC1D3FA6NER0 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TBC1D3FA6NER0 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TBC1D3FA6NER0 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TBC1D3FA6NER0 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
TBC1D3FA6NER0 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TBC1D3FA6NER0 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TBC1D3FA6NER0 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC16.84■□□□□ 0.29
TBC1D3FA6NER0 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TBC1D3FA6NER0 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
TBC1D3FA6NER0 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TBC1D3FA6NER0 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TBC1D3FA6NER0 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
TBC1D3FA6NER0 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
TBC1D3FA6NER0 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TBC1D3FA6NER0 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC16.84■□□□□ 0.29
TBC1D3FA6NER0 CBR1-202ENST00000399191 838 ntTSL 3 BASIC16.84■□□□□ 0.29
TBC1D3FA6NER0 AL627223.1-201ENST00000416693 442 ntBASIC16.84■□□□□ 0.29
TBC1D3FA6NER0 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
TBC1D3FA6NER0 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC16.84■□□□□ 0.29
TBC1D3FA6NER0 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
TBC1D3FA6NER0 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
TBC1D3FA6NER0 AC109322.1-201ENST00000524499 1264 ntBASIC16.84■□□□□ 0.29
TBC1D3FA6NER0 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC16.84■□□□□ 0.29
TBC1D3FA6NER0 LSM12-202ENST00000585388 942 ntTSL 3 BASIC16.84■□□□□ 0.29
TBC1D3FA6NER0 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC16.84■□□□□ 0.29
TBC1D3FA6NER0 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC16.84■□□□□ 0.29
TBC1D3FA6NER0 AP001350.2-201ENST00000625104 1094 ntBASIC16.84■□□□□ 0.29
TBC1D3FA6NER0 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC16.84■□□□□ 0.29
TBC1D3FA6NER0 AKAP8P1-201ENST00000434743 1349 ntBASIC16.84■□□□□ 0.29
TBC1D3FA6NER0 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms