Protein–RNA interactions for Protein: A0A5B6

TCRBV3S1, T-cell receptor beta variable 28 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV3S1A0A5B6 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC15.92■□□□□ 0.14
TCRBV3S1A0A5B6 STK19B-204ENST00000512515 211 ntBASIC15.92■□□□□ 0.14
TCRBV3S1A0A5B6 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC15.92■□□□□ 0.14
TCRBV3S1A0A5B6 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
TCRBV3S1A0A5B6 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
TCRBV3S1A0A5B6 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
TCRBV3S1A0A5B6 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
TCRBV3S1A0A5B6 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC15.92■□□□□ 0.14
TCRBV3S1A0A5B6 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
TCRBV3S1A0A5B6 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
TCRBV3S1A0A5B6 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
TCRBV3S1A0A5B6 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
TCRBV3S1A0A5B6 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC15.92■□□□□ 0.14
TCRBV3S1A0A5B6 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TCRBV3S1A0A5B6 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TCRBV3S1A0A5B6 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TCRBV3S1A0A5B6 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
TCRBV3S1A0A5B6 AC125634.1-201ENST00000438758 1403 ntBASIC15.92■□□□□ 0.14
TCRBV3S1A0A5B6 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC15.92■□□□□ 0.14
TCRBV3S1A0A5B6 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TCRBV3S1A0A5B6 GGT3P-204ENST00000453783 1664 ntBASIC15.92■□□□□ 0.14
TCRBV3S1A0A5B6 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
TCRBV3S1A0A5B6 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
TCRBV3S1A0A5B6 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC15.92■□□□□ 0.14
TCRBV3S1A0A5B6 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC15.91■□□□□ 0.14
TCRBV3S1A0A5B6 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
TCRBV3S1A0A5B6 GGT4P-201ENST00000623672 1708 ntBASIC15.91■□□□□ 0.14
TCRBV3S1A0A5B6 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC15.91■□□□□ 0.14
TCRBV3S1A0A5B6 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
TCRBV3S1A0A5B6 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TCRBV3S1A0A5B6 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TCRBV3S1A0A5B6 AC073347.1-201ENST00000421633 2643 ntBASIC15.91■□□□□ 0.14
TCRBV3S1A0A5B6 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC15.91■□□□□ 0.14
TCRBV3S1A0A5B6 AC002310.6-201ENST00000624451 1377 ntBASIC15.91■□□□□ 0.14
TCRBV3S1A0A5B6 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
TCRBV3S1A0A5B6 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TCRBV3S1A0A5B6 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TCRBV3S1A0A5B6 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
TCRBV3S1A0A5B6 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
TCRBV3S1A0A5B6 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
TCRBV3S1A0A5B6 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
TCRBV3S1A0A5B6 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
TCRBV3S1A0A5B6 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TCRBV3S1A0A5B6 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC15.91■□□□□ 0.14
TCRBV3S1A0A5B6 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
TCRBV3S1A0A5B6 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
TCRBV3S1A0A5B6 AL158047.1-201ENST00000445918 881 ntBASIC15.91■□□□□ 0.14
TCRBV3S1A0A5B6 FAM201B-201ENST00000458407 597 ntBASIC15.91■□□□□ 0.14
TCRBV3S1A0A5B6 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC15.91■□□□□ 0.14
TCRBV3S1A0A5B6 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC15.91■□□□□ 0.14
TCRBV3S1A0A5B6 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC15.91■□□□□ 0.14
TCRBV3S1A0A5B6 AL355075.4-201ENST00000554988 638 ntBASIC15.91■□□□□ 0.14
TCRBV3S1A0A5B6 ZNF444P1-201ENST00000559497 298 ntBASIC15.91■□□□□ 0.14
TCRBV3S1A0A5B6 NAPSB-206ENST00000562112 1266 ntBASIC15.91■□□□□ 0.14
TCRBV3S1A0A5B6 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
TCRBV3S1A0A5B6 SNX21-213ENST00000614929 587 ntTSL 5 BASIC15.91■□□□□ 0.14
TCRBV3S1A0A5B6 AC073912.3-201ENST00000624414 853 ntBASIC15.91■□□□□ 0.14
TCRBV3S1A0A5B6 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
TCRBV3S1A0A5B6 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TCRBV3S1A0A5B6 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
TCRBV3S1A0A5B6 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TCRBV3S1A0A5B6 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TCRBV3S1A0A5B6 AC013268.4-201ENST00000637413 2228 ntBASIC15.91■□□□□ 0.14
TCRBV3S1A0A5B6 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
TCRBV3S1A0A5B6 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
TCRBV3S1A0A5B6 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
TCRBV3S1A0A5B6 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
TCRBV3S1A0A5B6 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
TCRBV3S1A0A5B6 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC15.91■□□□□ 0.14
TCRBV3S1A0A5B6 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC15.91■□□□□ 0.14
TCRBV3S1A0A5B6 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC15.91■□□□□ 0.14
TCRBV3S1A0A5B6 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
TCRBV3S1A0A5B6 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC15.9■□□□□ 0.14
TCRBV3S1A0A5B6 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC15.9■□□□□ 0.14
TCRBV3S1A0A5B6 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
TCRBV3S1A0A5B6 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC15.9■□□□□ 0.14
TCRBV3S1A0A5B6 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
TCRBV3S1A0A5B6 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TCRBV3S1A0A5B6 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
TCRBV3S1A0A5B6 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC15.9■□□□□ 0.14
TCRBV3S1A0A5B6 AL136379.1-201ENST00000623471 2642 ntBASIC15.9■□□□□ 0.14
TCRBV3S1A0A5B6 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC15.9■□□□□ 0.14
TCRBV3S1A0A5B6 SP100-205ENST00000409824 1802 ntTSL 5 BASIC15.9■□□□□ 0.14
TCRBV3S1A0A5B6 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TCRBV3S1A0A5B6 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
TCRBV3S1A0A5B6 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TCRBV3S1A0A5B6 CRAT-202ENST00000393384 973 ntTSL 2 BASIC15.9■□□□□ 0.14
TCRBV3S1A0A5B6 SPDYE15P-201ENST00000424157 909 ntBASIC15.9■□□□□ 0.14
TCRBV3S1A0A5B6 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TCRBV3S1A0A5B6 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
TCRBV3S1A0A5B6 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC15.9■□□□□ 0.14
TCRBV3S1A0A5B6 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC15.9■□□□□ 0.14
TCRBV3S1A0A5B6 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
TCRBV3S1A0A5B6 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
TCRBV3S1A0A5B6 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TCRBV3S1A0A5B6 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TCRBV3S1A0A5B6 TSPY26P-202ENST00000565928 3884 ntBASIC15.9■□□□□ 0.14
TCRBV3S1A0A5B6 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC15.9■□□□□ 0.14
TCRBV3S1A0A5B6 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TCRBV3S1A0A5B6 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC15.9■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms