Protein–RNA interactions for Protein: Q9Y663

HS3ST3A1, Heparan sulfate glucosamine 3-O-sulfotransferase 3A1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HS3ST3A1Q9Y663 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
HS3ST3A1Q9Y663 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
HS3ST3A1Q9Y663 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HS3ST3A1Q9Y663 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC16.55■□□□□ 0.24
HS3ST3A1Q9Y663 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HS3ST3A1Q9Y663 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC16.55■□□□□ 0.24
HS3ST3A1Q9Y663 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
HS3ST3A1Q9Y663 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
HS3ST3A1Q9Y663 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HS3ST3A1Q9Y663 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
HS3ST3A1Q9Y663 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HS3ST3A1Q9Y663 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HS3ST3A1Q9Y663 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HS3ST3A1Q9Y663 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
HS3ST3A1Q9Y663 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
HS3ST3A1Q9Y663 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC16.54■□□□□ 0.24
HS3ST3A1Q9Y663 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HS3ST3A1Q9Y663 LINC00896-202ENST00000609602 2128 ntBASIC16.54■□□□□ 0.24
HS3ST3A1Q9Y663 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HS3ST3A1Q9Y663 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
HS3ST3A1Q9Y663 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC16.54■□□□□ 0.24
HS3ST3A1Q9Y663 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
HS3ST3A1Q9Y663 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
HS3ST3A1Q9Y663 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
HS3ST3A1Q9Y663 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC16.54■□□□□ 0.24
HS3ST3A1Q9Y663 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
HS3ST3A1Q9Y663 SPDYE7P-202ENST00000420373 878 ntBASIC16.54■□□□□ 0.24
HS3ST3A1Q9Y663 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC16.54■□□□□ 0.24
HS3ST3A1Q9Y663 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC16.54■□□□□ 0.24
HS3ST3A1Q9Y663 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
HS3ST3A1Q9Y663 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC16.54■□□□□ 0.24
HS3ST3A1Q9Y663 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC16.54■□□□□ 0.24
HS3ST3A1Q9Y663 SPCS2P1-201ENST00000561636 679 ntBASIC16.54■□□□□ 0.24
HS3ST3A1Q9Y663 AP000842.3-202ENST00000569238 1080 ntBASIC16.54■□□□□ 0.24
HS3ST3A1Q9Y663 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HS3ST3A1Q9Y663 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC16.54■□□□□ 0.24
HS3ST3A1Q9Y663 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC16.54■□□□□ 0.24
HS3ST3A1Q9Y663 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC16.54■□□□□ 0.24
HS3ST3A1Q9Y663 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC16.54■□□□□ 0.24
HS3ST3A1Q9Y663 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
HS3ST3A1Q9Y663 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
HS3ST3A1Q9Y663 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
HS3ST3A1Q9Y663 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC16.54■□□□□ 0.24
HS3ST3A1Q9Y663 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HS3ST3A1Q9Y663 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HS3ST3A1Q9Y663 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
HS3ST3A1Q9Y663 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC16.54■□□□□ 0.24
HS3ST3A1Q9Y663 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
HS3ST3A1Q9Y663 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
HS3ST3A1Q9Y663 AC090340.1-201ENST00000620778 4980 ntBASIC16.54■□□□□ 0.24
HS3ST3A1Q9Y663 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
HS3ST3A1Q9Y663 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HS3ST3A1Q9Y663 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
HS3ST3A1Q9Y663 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC16.54■□□□□ 0.24
HS3ST3A1Q9Y663 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
HS3ST3A1Q9Y663 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC16.54■□□□□ 0.24
HS3ST3A1Q9Y663 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC16.54■□□□□ 0.24
HS3ST3A1Q9Y663 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC16.54■□□□□ 0.24
HS3ST3A1Q9Y663 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC16.54■□□□□ 0.24
HS3ST3A1Q9Y663 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC16.54■□□□□ 0.24
HS3ST3A1Q9Y663 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
HS3ST3A1Q9Y663 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
HS3ST3A1Q9Y663 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
HS3ST3A1Q9Y663 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
HS3ST3A1Q9Y663 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
HS3ST3A1Q9Y663 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC16.53■□□□□ 0.24
HS3ST3A1Q9Y663 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
HS3ST3A1Q9Y663 AC016027.1-202ENST00000607927 1699 ntBASIC16.53■□□□□ 0.24
HS3ST3A1Q9Y663 AC068880.1-201ENST00000507289 2297 ntBASIC16.53■□□□□ 0.24
HS3ST3A1Q9Y663 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC16.53■□□□□ 0.24
HS3ST3A1Q9Y663 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
HS3ST3A1Q9Y663 TUBB3P1-201ENST00000405796 1332 ntBASIC16.53■□□□□ 0.24
HS3ST3A1Q9Y663 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
HS3ST3A1Q9Y663 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
HS3ST3A1Q9Y663 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
HS3ST3A1Q9Y663 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC16.53■□□□□ 0.24
HS3ST3A1Q9Y663 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
HS3ST3A1Q9Y663 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
HS3ST3A1Q9Y663 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC16.53■□□□□ 0.24
HS3ST3A1Q9Y663 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC16.53■□□□□ 0.24
HS3ST3A1Q9Y663 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
HS3ST3A1Q9Y663 FAM8A3P-201ENST00000427218 844 ntBASIC16.53■□□□□ 0.24
HS3ST3A1Q9Y663 WDR53-204ENST00000433160 887 ntTSL 5 BASIC16.53■□□□□ 0.24
HS3ST3A1Q9Y663 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
HS3ST3A1Q9Y663 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
HS3ST3A1Q9Y663 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC16.53■□□□□ 0.24
HS3ST3A1Q9Y663 DUT-210ENST00000559935 569 ntTSL 3 BASIC16.53■□□□□ 0.24
HS3ST3A1Q9Y663 AC026150.2-201ENST00000564693 1156 ntBASIC16.53■□□□□ 0.24
HS3ST3A1Q9Y663 AC051619.7-201ENST00000568314 623 ntBASIC16.53■□□□□ 0.24
HS3ST3A1Q9Y663 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
HS3ST3A1Q9Y663 AC013467.2-201ENST00000605472 835 ntBASIC16.53■□□□□ 0.24
HS3ST3A1Q9Y663 AL096865.1-201ENST00000606796 927 ntBASIC16.53■□□□□ 0.24
HS3ST3A1Q9Y663 RAB34-224ENST00000636513 888 ntTSL 5 BASIC16.53■□□□□ 0.24
HS3ST3A1Q9Y663 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC16.53■□□□□ 0.24
HS3ST3A1Q9Y663 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
HS3ST3A1Q9Y663 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC16.53■□□□□ 0.24
HS3ST3A1Q9Y663 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
HS3ST3A1Q9Y663 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
HS3ST3A1Q9Y663 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
HS3ST3A1Q9Y663 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms