Protein–RNA interactions for Protein: Q9Y282

ERGIC3, Endoplasmic reticulum-Golgi intermediate compartment protein 3, humanhuman

Predictions only

Length 383 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3Q9Y282 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
ERGIC3Q9Y282 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
ERGIC3Q9Y282 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
ERGIC3Q9Y282 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC15.57■□□□□ 0.08
ERGIC3Q9Y282 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
ERGIC3Q9Y282 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC15.57■□□□□ 0.08
ERGIC3Q9Y282 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
ERGIC3Q9Y282 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
ERGIC3Q9Y282 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
ERGIC3Q9Y282 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
ERGIC3Q9Y282 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC15.57■□□□□ 0.08
ERGIC3Q9Y282 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
ERGIC3Q9Y282 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
ERGIC3Q9Y282 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
ERGIC3Q9Y282 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
ERGIC3Q9Y282 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC15.57■□□□□ 0.08
ERGIC3Q9Y282 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
ERGIC3Q9Y282 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC15.56■□□□□ 0.08
ERGIC3Q9Y282 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
ERGIC3Q9Y282 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
ERGIC3Q9Y282 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
ERGIC3Q9Y282 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
ERGIC3Q9Y282 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
ERGIC3Q9Y282 CICP13-201ENST00000422015 2789 ntBASIC15.56■□□□□ 0.08
ERGIC3Q9Y282 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
ERGIC3Q9Y282 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
ERGIC3Q9Y282 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
ERGIC3Q9Y282 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
ERGIC3Q9Y282 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
ERGIC3Q9Y282 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
ERGIC3Q9Y282 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
ERGIC3Q9Y282 HES2-202ENST00000377836 507 ntTSL 2 BASIC15.56■□□□□ 0.08
ERGIC3Q9Y282 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
ERGIC3Q9Y282 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
ERGIC3Q9Y282 AC112698.1-201ENST00000510299 916 ntBASIC15.56■□□□□ 0.08
ERGIC3Q9Y282 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
ERGIC3Q9Y282 AC009154.2-201ENST00000621177 724 ntBASIC15.56■□□□□ 0.08
ERGIC3Q9Y282 AC010653.2-201ENST00000623505 997 ntBASIC15.56■□□□□ 0.08
ERGIC3Q9Y282 KRT89P-201ENST00000620027 1478 ntBASIC15.56■□□□□ 0.08
ERGIC3Q9Y282 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC15.56■□□□□ 0.08
ERGIC3Q9Y282 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC15.56■□□□□ 0.08
ERGIC3Q9Y282 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
ERGIC3Q9Y282 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
ERGIC3Q9Y282 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
ERGIC3Q9Y282 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
ERGIC3Q9Y282 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
ERGIC3Q9Y282 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC15.56■□□□□ 0.08
ERGIC3Q9Y282 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
ERGIC3Q9Y282 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
ERGIC3Q9Y282 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
ERGIC3Q9Y282 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
ERGIC3Q9Y282 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
ERGIC3Q9Y282 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC15.55■□□□□ 0.08
ERGIC3Q9Y282 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
ERGIC3Q9Y282 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
ERGIC3Q9Y282 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
ERGIC3Q9Y282 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
ERGIC3Q9Y282 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC15.55■□□□□ 0.08
ERGIC3Q9Y282 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
ERGIC3Q9Y282 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
ERGIC3Q9Y282 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
ERGIC3Q9Y282 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
ERGIC3Q9Y282 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
ERGIC3Q9Y282 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
ERGIC3Q9Y282 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
ERGIC3Q9Y282 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC15.55■□□□□ 0.08
ERGIC3Q9Y282 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
ERGIC3Q9Y282 PC-208ENST00000529047 1607 ntTSL 3 BASIC15.55■□□□□ 0.08
ERGIC3Q9Y282 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
ERGIC3Q9Y282 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC15.55■□□□□ 0.08
ERGIC3Q9Y282 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC15.55■□□□□ 0.08
ERGIC3Q9Y282 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
ERGIC3Q9Y282 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
ERGIC3Q9Y282 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC15.55■□□□□ 0.08
ERGIC3Q9Y282 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC15.55■□□□□ 0.08
ERGIC3Q9Y282 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC15.55■□□□□ 0.08
ERGIC3Q9Y282 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC15.55■□□□□ 0.08
ERGIC3Q9Y282 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC15.55■□□□□ 0.08
ERGIC3Q9Y282 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
ERGIC3Q9Y282 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
ERGIC3Q9Y282 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC15.55■□□□□ 0.08
ERGIC3Q9Y282 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC15.55■□□□□ 0.08
ERGIC3Q9Y282 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
ERGIC3Q9Y282 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC15.55■□□□□ 0.08
ERGIC3Q9Y282 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
ERGIC3Q9Y282 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC15.55■□□□□ 0.08
ERGIC3Q9Y282 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
ERGIC3Q9Y282 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC15.55■□□□□ 0.08
ERGIC3Q9Y282 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
ERGIC3Q9Y282 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC15.55■□□□□ 0.08
ERGIC3Q9Y282 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
ERGIC3Q9Y282 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC15.55■□□□□ 0.08
ERGIC3Q9Y282 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC15.55■□□□□ 0.08
ERGIC3Q9Y282 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
ERGIC3Q9Y282 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
ERGIC3Q9Y282 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
ERGIC3Q9Y282 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
ERGIC3Q9Y282 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC15.54■□□□□ 0.08
ERGIC3Q9Y282 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
ERGIC3Q9Y282 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC15.54■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms