Protein–RNA interactions for Protein: Q9UPQ9

TNRC6B, Trinucleotide repeat-containing gene 6B protein, humanhuman

Known RBP Predictions only

Length 1,833 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6BQ9UPQ9 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
TNRC6BQ9UPQ9 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
TNRC6BQ9UPQ9 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TNRC6BQ9UPQ9 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TNRC6BQ9UPQ9 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TNRC6BQ9UPQ9 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC16.28■□□□□ 0.2
TNRC6BQ9UPQ9 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC16.28■□□□□ 0.2
TNRC6BQ9UPQ9 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TNRC6BQ9UPQ9 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC16.28■□□□□ 0.2
TNRC6BQ9UPQ9 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC16.28■□□□□ 0.2
TNRC6BQ9UPQ9 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC16.28■□□□□ 0.2
TNRC6BQ9UPQ9 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TNRC6BQ9UPQ9 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC16.28■□□□□ 0.2
TNRC6BQ9UPQ9 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC16.28■□□□□ 0.2
TNRC6BQ9UPQ9 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC16.28■□□□□ 0.2
TNRC6BQ9UPQ9 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC16.28■□□□□ 0.2
TNRC6BQ9UPQ9 AC061975.2-201ENST00000581722 295 ntBASIC16.28■□□□□ 0.2
TNRC6BQ9UPQ9 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC16.28■□□□□ 0.2
TNRC6BQ9UPQ9 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TNRC6BQ9UPQ9 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC16.28■□□□□ 0.2
TNRC6BQ9UPQ9 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC16.28■□□□□ 0.2
TNRC6BQ9UPQ9 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC16.28■□□□□ 0.2
TNRC6BQ9UPQ9 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TNRC6BQ9UPQ9 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
TNRC6BQ9UPQ9 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC16.28■□□□□ 0.2
TNRC6BQ9UPQ9 TPR-209ENST00000613151 2478 ntTSL 5 BASIC16.27■□□□□ 0.2
TNRC6BQ9UPQ9 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
TNRC6BQ9UPQ9 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC16.27■□□□□ 0.2
TNRC6BQ9UPQ9 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
TNRC6BQ9UPQ9 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
TNRC6BQ9UPQ9 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC16.27■□□□□ 0.2
TNRC6BQ9UPQ9 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC16.27■□□□□ 0.2
TNRC6BQ9UPQ9 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
TNRC6BQ9UPQ9 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
TNRC6BQ9UPQ9 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC16.27■□□□□ 0.2
TNRC6BQ9UPQ9 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TNRC6BQ9UPQ9 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.2
TNRC6BQ9UPQ9 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TNRC6BQ9UPQ9 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TNRC6BQ9UPQ9 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
TNRC6BQ9UPQ9 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
TNRC6BQ9UPQ9 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC16.27■□□□□ 0.2
TNRC6BQ9UPQ9 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
TNRC6BQ9UPQ9 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC16.27■□□□□ 0.2
TNRC6BQ9UPQ9 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC16.27■□□□□ 0.2
TNRC6BQ9UPQ9 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
TNRC6BQ9UPQ9 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC16.27■□□□□ 0.2
TNRC6BQ9UPQ9 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC16.27■□□□□ 0.2
TNRC6BQ9UPQ9 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC16.27■□□□□ 0.2
TNRC6BQ9UPQ9 QPRT-203ENST00000562473 579 ntTSL 3 BASIC16.27■□□□□ 0.2
TNRC6BQ9UPQ9 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC16.27■□□□□ 0.2
TNRC6BQ9UPQ9 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
TNRC6BQ9UPQ9 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
TNRC6BQ9UPQ9 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TNRC6BQ9UPQ9 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
TNRC6BQ9UPQ9 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC16.27■□□□□ 0.19
TNRC6BQ9UPQ9 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
TNRC6BQ9UPQ9 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC16.27■□□□□ 0.19
TNRC6BQ9UPQ9 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
TNRC6BQ9UPQ9 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
TNRC6BQ9UPQ9 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TNRC6BQ9UPQ9 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TNRC6BQ9UPQ9 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC16.26■□□□□ 0.19
TNRC6BQ9UPQ9 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
TNRC6BQ9UPQ9 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
TNRC6BQ9UPQ9 TTTY23B-201ENST00000442790 549 ntBASIC16.26■□□□□ 0.19
TNRC6BQ9UPQ9 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TNRC6BQ9UPQ9 RAB35-202ENST00000534951 939 ntTSL 2 BASIC16.26■□□□□ 0.19
TNRC6BQ9UPQ9 AC008735.3-201ENST00000596646 500 ntBASIC16.26■□□□□ 0.19
TNRC6BQ9UPQ9 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC16.26■□□□□ 0.19
TNRC6BQ9UPQ9 5S_rRNA.22-201ENST00000614916 106 ntBASIC16.26■□□□□ 0.19
TNRC6BQ9UPQ9 MIR6805-201ENST00000615055 62 ntBASIC16.26■□□□□ 0.19
TNRC6BQ9UPQ9 AL033527.4-201ENST00000641026 673 ntBASIC16.26■□□□□ 0.19
TNRC6BQ9UPQ9 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TNRC6BQ9UPQ9 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TNRC6BQ9UPQ9 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TNRC6BQ9UPQ9 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
TNRC6BQ9UPQ9 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
TNRC6BQ9UPQ9 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TNRC6BQ9UPQ9 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TNRC6BQ9UPQ9 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
TNRC6BQ9UPQ9 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC16.26■□□□□ 0.19
TNRC6BQ9UPQ9 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC16.26■□□□□ 0.19
TNRC6BQ9UPQ9 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
TNRC6BQ9UPQ9 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TNRC6BQ9UPQ9 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
TNRC6BQ9UPQ9 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
TNRC6BQ9UPQ9 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TNRC6BQ9UPQ9 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TNRC6BQ9UPQ9 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TNRC6BQ9UPQ9 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TNRC6BQ9UPQ9 AC093004.1-201ENST00000508850 424 ntBASIC16.26■□□□□ 0.19
TNRC6BQ9UPQ9 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TNRC6BQ9UPQ9 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
TNRC6BQ9UPQ9 AC106886.1-201ENST00000568660 600 ntBASIC16.26■□□□□ 0.19
TNRC6BQ9UPQ9 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC16.26■□□□□ 0.19
TNRC6BQ9UPQ9 FHL2-212ENST00000607522 759 ntTSL 2 BASIC16.26■□□□□ 0.19
TNRC6BQ9UPQ9 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC16.26■□□□□ 0.19
TNRC6BQ9UPQ9 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TNRC6BQ9UPQ9 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms