Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC21.89■■□□□ 1.09
PDZRN3Q9UPQ7 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
PDZRN3Q9UPQ7 CALY-203ENST00000368558 825 ntTSL 5 BASIC21.89■■□□□ 1.09
PDZRN3Q9UPQ7 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
PDZRN3Q9UPQ7 SLC25A1P3-201ENST00000395415 828 ntBASIC21.89■■□□□ 1.09
PDZRN3Q9UPQ7 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC21.89■■□□□ 1.09
PDZRN3Q9UPQ7 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC21.89■■□□□ 1.09
PDZRN3Q9UPQ7 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC21.89■■□□□ 1.09
PDZRN3Q9UPQ7 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC21.89■■□□□ 1.09
PDZRN3Q9UPQ7 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.09
PDZRN3Q9UPQ7 KRT19P2-202ENST00000557173 1012 ntBASIC21.89■■□□□ 1.09
PDZRN3Q9UPQ7 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC21.89■■□□□ 1.09
PDZRN3Q9UPQ7 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC21.89■■□□□ 1.09
PDZRN3Q9UPQ7 AL096865.1-201ENST00000606796 927 ntBASIC21.89■■□□□ 1.09
PDZRN3Q9UPQ7 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC21.89■■□□□ 1.09
PDZRN3Q9UPQ7 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC21.89■■□□□ 1.09
PDZRN3Q9UPQ7 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC21.89■■□□□ 1.09
PDZRN3Q9UPQ7 AC007064.4-201ENST00000637740 555 ntBASIC21.89■■□□□ 1.09
PDZRN3Q9UPQ7 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
PDZRN3Q9UPQ7 HCG11-201ENST00000411553 5696 ntBASIC21.89■■□□□ 1.09
PDZRN3Q9UPQ7 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC21.89■■□□□ 1.09
PDZRN3Q9UPQ7 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC21.89■■□□□ 1.09
PDZRN3Q9UPQ7 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC21.89■■□□□ 1.09
PDZRN3Q9UPQ7 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC21.89■■□□□ 1.09
PDZRN3Q9UPQ7 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
PDZRN3Q9UPQ7 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
PDZRN3Q9UPQ7 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
PDZRN3Q9UPQ7 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
PDZRN3Q9UPQ7 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
PDZRN3Q9UPQ7 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
PDZRN3Q9UPQ7 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
PDZRN3Q9UPQ7 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
PDZRN3Q9UPQ7 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC21.88■■□□□ 1.09
PDZRN3Q9UPQ7 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
PDZRN3Q9UPQ7 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC21.88■■□□□ 1.09
PDZRN3Q9UPQ7 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC21.88■■□□□ 1.09
PDZRN3Q9UPQ7 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
PDZRN3Q9UPQ7 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC21.88■■□□□ 1.09
PDZRN3Q9UPQ7 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
PDZRN3Q9UPQ7 AP002414.1-201ENST00000391405 1147 ntBASIC21.88■■□□□ 1.09
PDZRN3Q9UPQ7 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
PDZRN3Q9UPQ7 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC21.88■■□□□ 1.09
PDZRN3Q9UPQ7 AL035633.1-201ENST00000406139 838 ntBASIC21.88■■□□□ 1.09
PDZRN3Q9UPQ7 AC074386.1-202ENST00000463561 864 ntBASIC21.88■■□□□ 1.09
PDZRN3Q9UPQ7 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC21.88■■□□□ 1.09
PDZRN3Q9UPQ7 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC21.88■■□□□ 1.09
PDZRN3Q9UPQ7 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC21.88■■□□□ 1.09
PDZRN3Q9UPQ7 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC21.88■■□□□ 1.09
PDZRN3Q9UPQ7 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC21.88■■□□□ 1.09
PDZRN3Q9UPQ7 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC21.88■■□□□ 1.09
PDZRN3Q9UPQ7 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
PDZRN3Q9UPQ7 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC21.88■■□□□ 1.09
PDZRN3Q9UPQ7 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
PDZRN3Q9UPQ7 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
PDZRN3Q9UPQ7 AC106886.4-201ENST00000623557 2502 ntBASIC21.88■■□□□ 1.09
PDZRN3Q9UPQ7 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
PDZRN3Q9UPQ7 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
PDZRN3Q9UPQ7 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
PDZRN3Q9UPQ7 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC21.88■■□□□ 1.09
PDZRN3Q9UPQ7 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
PDZRN3Q9UPQ7 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC21.88■■□□□ 1.09
PDZRN3Q9UPQ7 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
PDZRN3Q9UPQ7 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
PDZRN3Q9UPQ7 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC21.87■■□□□ 1.09
PDZRN3Q9UPQ7 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC21.87■■□□□ 1.09
PDZRN3Q9UPQ7 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC21.87■■□□□ 1.09
PDZRN3Q9UPQ7 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC21.87■■□□□ 1.09
PDZRN3Q9UPQ7 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC21.87■■□□□ 1.09
PDZRN3Q9UPQ7 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
PDZRN3Q9UPQ7 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC21.87■■□□□ 1.09
PDZRN3Q9UPQ7 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
PDZRN3Q9UPQ7 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
PDZRN3Q9UPQ7 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC21.87■■□□□ 1.09
PDZRN3Q9UPQ7 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
PDZRN3Q9UPQ7 RHBDF1P1-201ENST00000427504 1941 ntBASIC21.87■■□□□ 1.09
PDZRN3Q9UPQ7 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
PDZRN3Q9UPQ7 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
PDZRN3Q9UPQ7 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
PDZRN3Q9UPQ7 STOM-202ENST00000347359 870 ntTSL 2 BASIC21.87■■□□□ 1.09
PDZRN3Q9UPQ7 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
PDZRN3Q9UPQ7 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
PDZRN3Q9UPQ7 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
PDZRN3Q9UPQ7 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC21.87■■□□□ 1.09
PDZRN3Q9UPQ7 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC21.87■■□□□ 1.09
PDZRN3Q9UPQ7 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC21.87■■□□□ 1.09
PDZRN3Q9UPQ7 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC21.87■■□□□ 1.09
PDZRN3Q9UPQ7 AC004835.2-201ENST00000603762 682 ntBASIC21.87■■□□□ 1.09
PDZRN3Q9UPQ7 CITED2-204ENST00000618718 901 ntTSL 2 BASIC21.87■■□□□ 1.09
PDZRN3Q9UPQ7 AC010507.1-201ENST00000633895 436 ntBASIC21.87■■□□□ 1.09
PDZRN3Q9UPQ7 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
PDZRN3Q9UPQ7 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
PDZRN3Q9UPQ7 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
PDZRN3Q9UPQ7 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC21.87■■□□□ 1.09
PDZRN3Q9UPQ7 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
PDZRN3Q9UPQ7 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
PDZRN3Q9UPQ7 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC21.87■■□□□ 1.09
PDZRN3Q9UPQ7 PC-208ENST00000529047 1607 ntTSL 3 BASIC21.87■■□□□ 1.09
PDZRN3Q9UPQ7 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
PDZRN3Q9UPQ7 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
PDZRN3Q9UPQ7 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms