Protein–RNA interactions for Protein: Q9UN71

PCDHGB4, Protocadherin gamma-B4, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB4Q9UN71 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC16.55■□□□□ 0.24
PCDHGB4Q9UN71 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC16.55■□□□□ 0.24
PCDHGB4Q9UN71 ARL16-209ENST00000573715 763 ntTSL 3 BASIC16.55■□□□□ 0.24
PCDHGB4Q9UN71 ARL16-211ENST00000576135 694 ntTSL 3 BASIC16.55■□□□□ 0.24
PCDHGB4Q9UN71 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
PCDHGB4Q9UN71 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC16.55■□□□□ 0.24
PCDHGB4Q9UN71 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PCDHGB4Q9UN71 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PCDHGB4Q9UN71 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PCDHGB4Q9UN71 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC16.55■□□□□ 0.24
PCDHGB4Q9UN71 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PCDHGB4Q9UN71 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PCDHGB4Q9UN71 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PCDHGB4Q9UN71 AC092068.3-201ENST00000587894 2016 ntBASIC16.55■□□□□ 0.24
PCDHGB4Q9UN71 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PCDHGB4Q9UN71 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC16.55■□□□□ 0.24
PCDHGB4Q9UN71 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC16.55■□□□□ 0.24
PCDHGB4Q9UN71 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC16.54■□□□□ 0.24
PCDHGB4Q9UN71 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC16.54■□□□□ 0.24
PCDHGB4Q9UN71 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PCDHGB4Q9UN71 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC16.54■□□□□ 0.24
PCDHGB4Q9UN71 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PCDHGB4Q9UN71 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PCDHGB4Q9UN71 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
PCDHGB4Q9UN71 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PCDHGB4Q9UN71 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PCDHGB4Q9UN71 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
PCDHGB4Q9UN71 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC16.54■□□□□ 0.24
PCDHGB4Q9UN71 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC16.54■□□□□ 0.24
PCDHGB4Q9UN71 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PCDHGB4Q9UN71 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC16.54■□□□□ 0.24
PCDHGB4Q9UN71 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PCDHGB4Q9UN71 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC16.54■□□□□ 0.24
PCDHGB4Q9UN71 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PCDHGB4Q9UN71 TSPY22P-201ENST00000427496 604 ntBASIC16.54■□□□□ 0.24
PCDHGB4Q9UN71 AC022616.7-201ENST00000525383 220 ntBASIC16.54■□□□□ 0.24
PCDHGB4Q9UN71 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PCDHGB4Q9UN71 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PCDHGB4Q9UN71 AC011840.4-201ENST00000578471 627 ntBASIC16.54■□□□□ 0.24
PCDHGB4Q9UN71 AC090616.6-201ENST00000582640 721 ntBASIC16.54■□□□□ 0.24
PCDHGB4Q9UN71 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC16.54■□□□□ 0.24
PCDHGB4Q9UN71 IGHV3-41-201ENST00000613121 348 ntBASIC16.54■□□□□ 0.24
PCDHGB4Q9UN71 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC16.54■□□□□ 0.24
PCDHGB4Q9UN71 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC16.54■□□□□ 0.24
PCDHGB4Q9UN71 AC124864.1-201ENST00000623408 392 ntBASIC16.54■□□□□ 0.24
PCDHGB4Q9UN71 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
PCDHGB4Q9UN71 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PCDHGB4Q9UN71 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
PCDHGB4Q9UN71 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC16.54■□□□□ 0.24
PCDHGB4Q9UN71 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
PCDHGB4Q9UN71 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC16.54■□□□□ 0.24
PCDHGB4Q9UN71 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PCDHGB4Q9UN71 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PCDHGB4Q9UN71 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
PCDHGB4Q9UN71 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
PCDHGB4Q9UN71 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
PCDHGB4Q9UN71 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PCDHGB4Q9UN71 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
PCDHGB4Q9UN71 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PCDHGB4Q9UN71 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PCDHGB4Q9UN71 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PCDHGB4Q9UN71 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PCDHGB4Q9UN71 AC116353.5-201ENST00000638148 1699 ntBASIC16.53■□□□□ 0.24
PCDHGB4Q9UN71 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC16.53■□□□□ 0.24
PCDHGB4Q9UN71 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PCDHGB4Q9UN71 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PCDHGB4Q9UN71 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PCDHGB4Q9UN71 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PCDHGB4Q9UN71 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
PCDHGB4Q9UN71 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PCDHGB4Q9UN71 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PCDHGB4Q9UN71 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC16.53■□□□□ 0.24
PCDHGB4Q9UN71 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PCDHGB4Q9UN71 AC005052.1-201ENST00000625181 2492 ntBASIC16.53■□□□□ 0.24
PCDHGB4Q9UN71 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC16.53■□□□□ 0.24
PCDHGB4Q9UN71 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
PCDHGB4Q9UN71 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PCDHGB4Q9UN71 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC16.53■□□□□ 0.24
PCDHGB4Q9UN71 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PCDHGB4Q9UN71 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC16.53■□□□□ 0.24
PCDHGB4Q9UN71 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
PCDHGB4Q9UN71 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PCDHGB4Q9UN71 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PCDHGB4Q9UN71 DAP-202ENST00000432074 1048 ntTSL 2 BASIC16.53■□□□□ 0.24
PCDHGB4Q9UN71 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC16.53■□□□□ 0.24
PCDHGB4Q9UN71 AC111152.3-201ENST00000569699 673 ntBASIC16.53■□□□□ 0.24
PCDHGB4Q9UN71 AC083849.1-201ENST00000615227 514 ntBASIC16.53■□□□□ 0.24
PCDHGB4Q9UN71 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC16.53■□□□□ 0.24
PCDHGB4Q9UN71 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
PCDHGB4Q9UN71 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
PCDHGB4Q9UN71 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC16.53■□□□□ 0.24
PCDHGB4Q9UN71 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC16.53■□□□□ 0.24
PCDHGB4Q9UN71 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
PCDHGB4Q9UN71 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC16.53■□□□□ 0.24
PCDHGB4Q9UN71 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC16.53■□□□□ 0.24
PCDHGB4Q9UN71 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC16.53■□□□□ 0.24
PCDHGB4Q9UN71 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PCDHGB4Q9UN71 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC16.53■□□□□ 0.24
PCDHGB4Q9UN71 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC16.52■□□□□ 0.24
PCDHGB4Q9UN71 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC16.52■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms