Protein–RNA interactions for Protein: Q9UI42

CPA4, Carboxypeptidase A4, humanhuman

Predictions only

Length 421 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPA4Q9UI42 AC021097.1-201ENST00000607902 574 ntBASIC19.19■□□□□ 0.66
CPA4Q9UI42 AC017083.2-201ENST00000608069 979 ntBASIC19.19■□□□□ 0.66
CPA4Q9UI42 AL591163.1-201ENST00000641757 987 ntBASIC19.19■□□□□ 0.66
CPA4Q9UI42 AC012317.2-201ENST00000623305 2251 ntBASIC19.19■□□□□ 0.66
CPA4Q9UI42 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CPA4Q9UI42 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
CPA4Q9UI42 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
CPA4Q9UI42 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
CPA4Q9UI42 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CPA4Q9UI42 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
CPA4Q9UI42 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CPA4Q9UI42 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
CPA4Q9UI42 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CPA4Q9UI42 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CPA4Q9UI42 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CPA4Q9UI42 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CPA4Q9UI42 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
CPA4Q9UI42 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC19.18■□□□□ 0.66
CPA4Q9UI42 FOS-208ENST00000555686 1496 ntTSL 2 BASIC19.18■□□□□ 0.66
CPA4Q9UI42 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC19.18■□□□□ 0.66
CPA4Q9UI42 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CPA4Q9UI42 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CPA4Q9UI42 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
CPA4Q9UI42 HLA-H-201ENST00000383620 1096 ntBASIC19.18■□□□□ 0.66
CPA4Q9UI42 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC19.18■□□□□ 0.66
CPA4Q9UI42 AL353705.2-201ENST00000428243 662 ntBASIC19.18■□□□□ 0.66
CPA4Q9UI42 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC19.18■□□□□ 0.66
CPA4Q9UI42 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC19.18■□□□□ 0.66
CPA4Q9UI42 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC19.18■□□□□ 0.66
CPA4Q9UI42 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC19.18■□□□□ 0.66
CPA4Q9UI42 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CPA4Q9UI42 EGFEM1P-202ENST00000431685 1563 ntBASIC19.18■□□□□ 0.66
CPA4Q9UI42 AL138781.2-201ENST00000617896 1843 ntBASIC19.18■□□□□ 0.66
CPA4Q9UI42 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CPA4Q9UI42 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC19.18■□□□□ 0.66
CPA4Q9UI42 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CPA4Q9UI42 LINC00895-201ENST00000629028 1637 ntBASIC19.18■□□□□ 0.66
CPA4Q9UI42 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CPA4Q9UI42 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CPA4Q9UI42 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC19.17■□□□□ 0.66
CPA4Q9UI42 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
CPA4Q9UI42 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC19.17■□□□□ 0.66
CPA4Q9UI42 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC19.17■□□□□ 0.66
CPA4Q9UI42 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC19.17■□□□□ 0.66
CPA4Q9UI42 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC19.17■□□□□ 0.66
CPA4Q9UI42 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CPA4Q9UI42 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CPA4Q9UI42 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC19.17■□□□□ 0.66
CPA4Q9UI42 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
CPA4Q9UI42 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
CPA4Q9UI42 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC19.17■□□□□ 0.66
CPA4Q9UI42 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC19.17■□□□□ 0.66
CPA4Q9UI42 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CPA4Q9UI42 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CPA4Q9UI42 MXI1-205ENST00000393134 889 ntTSL 2 BASIC19.17■□□□□ 0.66
CPA4Q9UI42 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CPA4Q9UI42 RN7SL752P-201ENST00000463779 287 ntBASIC19.17■□□□□ 0.66
CPA4Q9UI42 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC19.17■□□□□ 0.66
CPA4Q9UI42 AC135586.1-201ENST00000539323 574 ntBASIC19.17■□□□□ 0.66
CPA4Q9UI42 POLE2-203ENST00000553805 496 ntTSL 2 BASIC19.17■□□□□ 0.66
CPA4Q9UI42 LITAF-210ENST00000571976 548 ntTSL 2 BASIC19.17■□□□□ 0.66
CPA4Q9UI42 LITAF-214ENST00000574703 486 ntTSL 2 BASIC19.17■□□□□ 0.66
CPA4Q9UI42 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC19.17■□□□□ 0.66
CPA4Q9UI42 RN7SL828P-201ENST00000607615 303 ntBASIC19.17■□□□□ 0.66
CPA4Q9UI42 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC19.17■□□□□ 0.66
CPA4Q9UI42 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CPA4Q9UI42 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CPA4Q9UI42 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CPA4Q9UI42 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
CPA4Q9UI42 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC19.17■□□□□ 0.66
CPA4Q9UI42 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CPA4Q9UI42 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
CPA4Q9UI42 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CPA4Q9UI42 AC098818.2-201ENST00000564925 2320 ntBASIC19.17■□□□□ 0.66
CPA4Q9UI42 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC19.17■□□□□ 0.66
CPA4Q9UI42 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
CPA4Q9UI42 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CPA4Q9UI42 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CPA4Q9UI42 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CPA4Q9UI42 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CPA4Q9UI42 PXK-206ENST00000463280 2825 ntTSL 2 BASIC19.16■□□□□ 0.66
CPA4Q9UI42 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CPA4Q9UI42 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CPA4Q9UI42 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
CPA4Q9UI42 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC19.16■□□□□ 0.66
CPA4Q9UI42 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CPA4Q9UI42 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
CPA4Q9UI42 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CPA4Q9UI42 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CPA4Q9UI42 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
CPA4Q9UI42 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CPA4Q9UI42 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CPA4Q9UI42 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC19.16■□□□□ 0.66
CPA4Q9UI42 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC19.16■□□□□ 0.66
CPA4Q9UI42 MIR1909-201ENST00000411312 80 ntBASIC19.16■□□□□ 0.66
CPA4Q9UI42 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC19.16■□□□□ 0.66
CPA4Q9UI42 STARD13-205ENST00000439831 945 ntTSL 2 BASIC19.16■□□□□ 0.66
CPA4Q9UI42 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC19.16■□□□□ 0.66
CPA4Q9UI42 PRYP6-201ENST00000514804 343 ntBASIC19.16■□□□□ 0.66
CPA4Q9UI42 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 65.9 ms