Protein–RNA interactions for Protein: Q9HD45

TM9SF3, Transmembrane 9 superfamily member 3, humanhuman

Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3Q9HD45 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC16.99■□□□□ 0.31
TM9SF3Q9HD45 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC16.99■□□□□ 0.31
TM9SF3Q9HD45 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
TM9SF3Q9HD45 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
TM9SF3Q9HD45 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
TM9SF3Q9HD45 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC16.99■□□□□ 0.31
TM9SF3Q9HD45 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC16.99■□□□□ 0.31
TM9SF3Q9HD45 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
TM9SF3Q9HD45 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TM9SF3Q9HD45 TNRC18P3-201ENST00000441896 2691 ntBASIC16.99■□□□□ 0.31
TM9SF3Q9HD45 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TM9SF3Q9HD45 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
TM9SF3Q9HD45 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
TM9SF3Q9HD45 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC16.99■□□□□ 0.31
TM9SF3Q9HD45 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TM9SF3Q9HD45 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC16.99■□□□□ 0.31
TM9SF3Q9HD45 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
TM9SF3Q9HD45 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TM9SF3Q9HD45 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
TM9SF3Q9HD45 FAM8A3P-201ENST00000427218 844 ntBASIC16.99■□□□□ 0.31
TM9SF3Q9HD45 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC16.99■□□□□ 0.31
TM9SF3Q9HD45 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC16.99■□□□□ 0.31
TM9SF3Q9HD45 AC087163.2-201ENST00000457299 853 ntBASIC16.99■□□□□ 0.31
TM9SF3Q9HD45 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
TM9SF3Q9HD45 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC16.99■□□□□ 0.31
TM9SF3Q9HD45 AC112191.1-201ENST00000523689 701 ntBASIC16.99■□□□□ 0.31
TM9SF3Q9HD45 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC16.99■□□□□ 0.31
TM9SF3Q9HD45 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC16.99■□□□□ 0.31
TM9SF3Q9HD45 AC011467.4-201ENST00000594891 528 ntBASIC16.99■□□□□ 0.31
TM9SF3Q9HD45 AC092364.2-202ENST00000597012 1073 ntBASIC16.99■□□□□ 0.31
TM9SF3Q9HD45 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC16.99■□□□□ 0.31
TM9SF3Q9HD45 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TM9SF3Q9HD45 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC16.99■□□□□ 0.31
TM9SF3Q9HD45 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC16.99■□□□□ 0.31
TM9SF3Q9HD45 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC16.99■□□□□ 0.31
TM9SF3Q9HD45 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC16.99■□□□□ 0.31
TM9SF3Q9HD45 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC16.99■□□□□ 0.31
TM9SF3Q9HD45 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
TM9SF3Q9HD45 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TM9SF3Q9HD45 CYP51A1P2-201ENST00000419457 1499 ntBASIC16.99■□□□□ 0.31
TM9SF3Q9HD45 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
TM9SF3Q9HD45 PP12613-201ENST00000424958 2230 ntBASIC16.98■□□□□ 0.31
TM9SF3Q9HD45 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC16.98■□□□□ 0.31
TM9SF3Q9HD45 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
TM9SF3Q9HD45 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TM9SF3Q9HD45 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TM9SF3Q9HD45 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TM9SF3Q9HD45 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TM9SF3Q9HD45 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
TM9SF3Q9HD45 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
TM9SF3Q9HD45 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC16.98■□□□□ 0.31
TM9SF3Q9HD45 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TM9SF3Q9HD45 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
TM9SF3Q9HD45 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC16.98■□□□□ 0.31
TM9SF3Q9HD45 AC080080.1-201ENST00000625121 2420 ntBASIC16.98■□□□□ 0.31
TM9SF3Q9HD45 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
TM9SF3Q9HD45 AC106820.2-201ENST00000563775 3264 ntBASIC16.98■□□□□ 0.31
TM9SF3Q9HD45 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC16.98■□□□□ 0.31
TM9SF3Q9HD45 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC16.98■□□□□ 0.31
TM9SF3Q9HD45 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TM9SF3Q9HD45 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
TM9SF3Q9HD45 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC16.98■□□□□ 0.31
TM9SF3Q9HD45 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TM9SF3Q9HD45 FALEC-201ENST00000416894 566 ntTSL 3 BASIC16.98■□□□□ 0.31
TM9SF3Q9HD45 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC16.98■□□□□ 0.31
TM9SF3Q9HD45 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
TM9SF3Q9HD45 NMU-203ENST00000507338 658 ntTSL 3 BASIC16.98■□□□□ 0.31
TM9SF3Q9HD45 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC16.98■□□□□ 0.31
TM9SF3Q9HD45 LSM12-202ENST00000585388 942 ntTSL 3 BASIC16.98■□□□□ 0.31
TM9SF3Q9HD45 AL139327.4-201ENST00000612362 153 ntBASIC16.98■□□□□ 0.31
TM9SF3Q9HD45 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC16.98■□□□□ 0.31
TM9SF3Q9HD45 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC16.98■□□□□ 0.31
TM9SF3Q9HD45 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC16.98■□□□□ 0.31
TM9SF3Q9HD45 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
TM9SF3Q9HD45 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
TM9SF3Q9HD45 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC16.98■□□□□ 0.31
TM9SF3Q9HD45 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TM9SF3Q9HD45 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
TM9SF3Q9HD45 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
TM9SF3Q9HD45 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
TM9SF3Q9HD45 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
TM9SF3Q9HD45 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TM9SF3Q9HD45 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TM9SF3Q9HD45 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TM9SF3Q9HD45 AC129492.6-201ENST00000611383 1305 ntBASIC16.97■□□□□ 0.31
TM9SF3Q9HD45 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TM9SF3Q9HD45 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC16.97■□□□□ 0.31
TM9SF3Q9HD45 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC16.97■□□□□ 0.31
TM9SF3Q9HD45 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
TM9SF3Q9HD45 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
TM9SF3Q9HD45 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
TM9SF3Q9HD45 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC16.97■□□□□ 0.31
TM9SF3Q9HD45 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
TM9SF3Q9HD45 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TM9SF3Q9HD45 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC16.97■□□□□ 0.31
TM9SF3Q9HD45 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TM9SF3Q9HD45 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
TM9SF3Q9HD45 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC16.97■□□□□ 0.31
TM9SF3Q9HD45 DAD1-205ENST00000543337 501 ntTSL 3 BASIC16.97■□□□□ 0.31
TM9SF3Q9HD45 IGHV3OR16-6-201ENST00000568775 360 ntBASIC16.97■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 65.6 ms