Protein–RNA interactions for Protein: Q9H7N4

SCAF1, Splicing factor, arginine/serine-rich 19, humanhuman

Known RBP Predictions only

Length 1,312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1Q9H7N4 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
SCAF1Q9H7N4 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC25.48■■□□□ 1.67
SCAF1Q9H7N4 AL109659.2-201ENST00000606809 1674 ntBASIC25.48■■□□□ 1.67
SCAF1Q9H7N4 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
SCAF1Q9H7N4 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
SCAF1Q9H7N4 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC25.47■■□□□ 1.67
SCAF1Q9H7N4 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
SCAF1Q9H7N4 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
SCAF1Q9H7N4 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC25.47■■□□□ 1.67
SCAF1Q9H7N4 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
SCAF1Q9H7N4 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC25.47■■□□□ 1.67
SCAF1Q9H7N4 AL160408.1-203ENST00000453568 631 ntTSL 5 BASIC25.47■■□□□ 1.67
SCAF1Q9H7N4 AC106732.1-201ENST00000512458 550 ntTSL 4 BASIC25.47■■□□□ 1.67
SCAF1Q9H7N4 REEP1-209ENST00000541910 969 ntTSL 2 BASIC25.47■■□□□ 1.67
SCAF1Q9H7N4 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC25.47■■□□□ 1.67
SCAF1Q9H7N4 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC25.47■■□□□ 1.67
SCAF1Q9H7N4 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC25.47■■□□□ 1.67
SCAF1Q9H7N4 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC25.47■■□□□ 1.67
SCAF1Q9H7N4 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
SCAF1Q9H7N4 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
SCAF1Q9H7N4 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC25.47■■□□□ 1.67
SCAF1Q9H7N4 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
SCAF1Q9H7N4 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
SCAF1Q9H7N4 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
SCAF1Q9H7N4 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC25.47■■□□□ 1.67
SCAF1Q9H7N4 UBQLN4P1-201ENST00000461599 1801 ntBASIC25.47■■□□□ 1.67
SCAF1Q9H7N4 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC25.47■■□□□ 1.67
SCAF1Q9H7N4 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
SCAF1Q9H7N4 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC25.46■■□□□ 1.67
SCAF1Q9H7N4 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
SCAF1Q9H7N4 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
SCAF1Q9H7N4 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC25.46■■□□□ 1.67
SCAF1Q9H7N4 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
SCAF1Q9H7N4 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC25.46■■□□□ 1.67
SCAF1Q9H7N4 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
SCAF1Q9H7N4 BOLA3-201ENST00000295326 444 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
SCAF1Q9H7N4 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
SCAF1Q9H7N4 AL139400.1-201ENST00000366220 510 ntBASIC25.46■■□□□ 1.67
SCAF1Q9H7N4 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
SCAF1Q9H7N4 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC25.46■■□□□ 1.67
SCAF1Q9H7N4 AC108751.1-201ENST00000490852 363 ntBASIC25.46■■□□□ 1.67
SCAF1Q9H7N4 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
SCAF1Q9H7N4 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC25.46■■□□□ 1.67
SCAF1Q9H7N4 AL513190.1-201ENST00000621254 727 ntBASIC25.46■■□□□ 1.67
SCAF1Q9H7N4 KRT89P-201ENST00000620027 1478 ntBASIC25.46■■□□□ 1.67
SCAF1Q9H7N4 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC25.46■■□□□ 1.67
SCAF1Q9H7N4 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC25.46■■□□□ 1.67
SCAF1Q9H7N4 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
SCAF1Q9H7N4 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC25.46■■□□□ 1.67
SCAF1Q9H7N4 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC25.46■■□□□ 1.67
SCAF1Q9H7N4 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
SCAF1Q9H7N4 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
SCAF1Q9H7N4 MYB-201ENST00000316528 3571 ntTSL 5 BASIC25.46■■□□□ 1.67
SCAF1Q9H7N4 MYB-241ENST00000616088 3573 ntTSL 5 BASIC25.46■■□□□ 1.67
SCAF1Q9H7N4 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
SCAF1Q9H7N4 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC25.46■■□□□ 1.67
SCAF1Q9H7N4 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC25.46■■□□□ 1.67
SCAF1Q9H7N4 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC25.45■■□□□ 1.67
SCAF1Q9H7N4 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.67
SCAF1Q9H7N4 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.67
SCAF1Q9H7N4 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC25.45■■□□□ 1.67
SCAF1Q9H7N4 LINC00463-201ENST00000413501 1147 ntTSL 3 BASIC25.45■■□□□ 1.66
SCAF1Q9H7N4 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC25.45■■□□□ 1.66
SCAF1Q9H7N4 MSRA-206ENST00000521209 814 ntTSL 3 BASIC25.45■■□□□ 1.66
SCAF1Q9H7N4 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
SCAF1Q9H7N4 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC25.45■■□□□ 1.66
SCAF1Q9H7N4 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
SCAF1Q9H7N4 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC25.45■■□□□ 1.66
SCAF1Q9H7N4 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC25.45■■□□□ 1.66
SCAF1Q9H7N4 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC25.45■■□□□ 1.66
SCAF1Q9H7N4 AC022960.2-201ENST00000616300 666 ntBASIC25.45■■□□□ 1.66
SCAF1Q9H7N4 AL139288.1-201ENST00000623748 933 ntBASIC25.45■■□□□ 1.66
SCAF1Q9H7N4 SERF2-217ENST00000630046 862 ntTSL 5 BASIC25.45■■□□□ 1.66
SCAF1Q9H7N4 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
SCAF1Q9H7N4 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC25.45■■□□□ 1.66
SCAF1Q9H7N4 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
SCAF1Q9H7N4 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC25.45■■□□□ 1.66
SCAF1Q9H7N4 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
SCAF1Q9H7N4 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC25.45■■□□□ 1.66
SCAF1Q9H7N4 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
SCAF1Q9H7N4 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
SCAF1Q9H7N4 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
SCAF1Q9H7N4 H3F3A-201ENST00000366813 1308 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
SCAF1Q9H7N4 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
SCAF1Q9H7N4 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC25.44■■□□□ 1.66
SCAF1Q9H7N4 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
SCAF1Q9H7N4 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC25.44■■□□□ 1.66
SCAF1Q9H7N4 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
SCAF1Q9H7N4 HCG24-202ENST00000414398 717 ntTSL 3 BASIC25.44■■□□□ 1.66
SCAF1Q9H7N4 CCND1-203ENST00000536559 553 ntTSL 3 BASIC25.44■■□□□ 1.66
SCAF1Q9H7N4 AC005225.4-201ENST00000557330 545 ntBASIC25.44■■□□□ 1.66
SCAF1Q9H7N4 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC25.44■■□□□ 1.66
SCAF1Q9H7N4 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC25.44■■□□□ 1.66
SCAF1Q9H7N4 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC25.44■■□□□ 1.66
SCAF1Q9H7N4 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC25.44■■□□□ 1.66
SCAF1Q9H7N4 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC25.44■■□□□ 1.66
SCAF1Q9H7N4 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC25.44■■□□□ 1.66
SCAF1Q9H7N4 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC25.44■■□□□ 1.66
SCAF1Q9H7N4 NARF-204ENST00000390006 1766 ntTSL 2 BASIC25.44■■□□□ 1.66
SCAF1Q9H7N4 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms