Protein–RNA interactions for Protein: Q9BZ76

CNTNAP3, Contactin-associated protein-like 3, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3Q9BZ76 IRX1P1-201ENST00000438849 1838 ntBASIC16.15■□□□□ 0.18
CNTNAP3Q9BZ76 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CNTNAP3Q9BZ76 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC16.15■□□□□ 0.18
CNTNAP3Q9BZ76 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CNTNAP3Q9BZ76 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
CNTNAP3Q9BZ76 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CNTNAP3Q9BZ76 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CNTNAP3Q9BZ76 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CNTNAP3Q9BZ76 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CNTNAP3Q9BZ76 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC16.15■□□□□ 0.18
CNTNAP3Q9BZ76 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC16.15■□□□□ 0.18
CNTNAP3Q9BZ76 LINC00982-205ENST00000420957 435 ntBASIC16.15■□□□□ 0.18
CNTNAP3Q9BZ76 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC16.15■□□□□ 0.18
CNTNAP3Q9BZ76 DGUOK-AS1-202ENST00000439192 563 ntTSL 2 BASIC16.15■□□□□ 0.18
CNTNAP3Q9BZ76 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC16.15■□□□□ 0.18
CNTNAP3Q9BZ76 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC16.15■□□□□ 0.18
CNTNAP3Q9BZ76 FUZ-207ENST00000526575 482 ntTSL 4 BASIC16.15■□□□□ 0.18
CNTNAP3Q9BZ76 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC16.15■□□□□ 0.18
CNTNAP3Q9BZ76 AGER-214ENST00000538695 487 ntTSL 2 BASIC16.15■□□□□ 0.18
CNTNAP3Q9BZ76 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC16.15■□□□□ 0.18
CNTNAP3Q9BZ76 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
CNTNAP3Q9BZ76 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC16.15■□□□□ 0.18
CNTNAP3Q9BZ76 AL049757.1-201ENST00000616842 1596 ntBASIC16.15■□□□□ 0.18
CNTNAP3Q9BZ76 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CNTNAP3Q9BZ76 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC16.15■□□□□ 0.18
CNTNAP3Q9BZ76 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CNTNAP3Q9BZ76 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CNTNAP3Q9BZ76 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CNTNAP3Q9BZ76 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC16.15■□□□□ 0.18
CNTNAP3Q9BZ76 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC16.15■□□□□ 0.18
CNTNAP3Q9BZ76 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
CNTNAP3Q9BZ76 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CNTNAP3Q9BZ76 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CNTNAP3Q9BZ76 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CNTNAP3Q9BZ76 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC16.15■□□□□ 0.18
CNTNAP3Q9BZ76 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CNTNAP3Q9BZ76 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CNTNAP3Q9BZ76 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
CNTNAP3Q9BZ76 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
CNTNAP3Q9BZ76 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.18
CNTNAP3Q9BZ76 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.18
CNTNAP3Q9BZ76 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.18
CNTNAP3Q9BZ76 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC16.14■□□□□ 0.17
CNTNAP3Q9BZ76 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CNTNAP3Q9BZ76 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC16.14■□□□□ 0.17
CNTNAP3Q9BZ76 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CNTNAP3Q9BZ76 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
CNTNAP3Q9BZ76 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
CNTNAP3Q9BZ76 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CNTNAP3Q9BZ76 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CNTNAP3Q9BZ76 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC16.14■□□□□ 0.17
CNTNAP3Q9BZ76 COMP-202ENST00000425807 2292 ntTSL 2 BASIC16.14■□□□□ 0.17
CNTNAP3Q9BZ76 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC16.14■□□□□ 0.17
CNTNAP3Q9BZ76 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CNTNAP3Q9BZ76 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC16.14■□□□□ 0.17
CNTNAP3Q9BZ76 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC16.14■□□□□ 0.17
CNTNAP3Q9BZ76 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CNTNAP3Q9BZ76 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
CNTNAP3Q9BZ76 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC16.14■□□□□ 0.17
CNTNAP3Q9BZ76 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC16.14■□□□□ 0.17
CNTNAP3Q9BZ76 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC16.14■□□□□ 0.17
CNTNAP3Q9BZ76 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CNTNAP3Q9BZ76 LDHBP1-201ENST00000455730 1119 ntBASIC16.14■□□□□ 0.17
CNTNAP3Q9BZ76 CROCCP4-201ENST00000457096 498 ntBASIC16.14■□□□□ 0.17
CNTNAP3Q9BZ76 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC16.14■□□□□ 0.17
CNTNAP3Q9BZ76 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC16.14■□□□□ 0.17
CNTNAP3Q9BZ76 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CNTNAP3Q9BZ76 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CNTNAP3Q9BZ76 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CNTNAP3Q9BZ76 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CNTNAP3Q9BZ76 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CNTNAP3Q9BZ76 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC16.14■□□□□ 0.17
CNTNAP3Q9BZ76 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CNTNAP3Q9BZ76 NFYC-AS1-201ENST00000606277 1687 ntBASIC16.14■□□□□ 0.17
CNTNAP3Q9BZ76 GRAMD4P3-201ENST00000621665 1669 ntBASIC16.14■□□□□ 0.17
CNTNAP3Q9BZ76 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
CNTNAP3Q9BZ76 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CNTNAP3Q9BZ76 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC16.14■□□□□ 0.17
CNTNAP3Q9BZ76 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
CNTNAP3Q9BZ76 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
CNTNAP3Q9BZ76 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CNTNAP3Q9BZ76 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CNTNAP3Q9BZ76 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
CNTNAP3Q9BZ76 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CNTNAP3Q9BZ76 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC16.13■□□□□ 0.17
CNTNAP3Q9BZ76 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
CNTNAP3Q9BZ76 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CNTNAP3Q9BZ76 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
CNTNAP3Q9BZ76 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC16.13■□□□□ 0.17
CNTNAP3Q9BZ76 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CNTNAP3Q9BZ76 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CNTNAP3Q9BZ76 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CNTNAP3Q9BZ76 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CNTNAP3Q9BZ76 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CNTNAP3Q9BZ76 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CNTNAP3Q9BZ76 AC253536.4-201ENST00000440539 267 ntBASIC16.13■□□□□ 0.17
CNTNAP3Q9BZ76 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC16.13■□□□□ 0.17
CNTNAP3Q9BZ76 AL355994.2-201ENST00000447882 704 ntBASIC16.13■□□□□ 0.17
CNTNAP3Q9BZ76 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC16.13■□□□□ 0.17
CNTNAP3Q9BZ76 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 56.9 ms