Protein–RNA interactions for Protein: Q9BY71

LRRC3, Leucine-rich repeat-containing protein 3, humanhuman

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC3Q9BY71 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LRRC3Q9BY71 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LRRC3Q9BY71 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC17.67■□□□□ 0.42
LRRC3Q9BY71 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
LRRC3Q9BY71 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
LRRC3Q9BY71 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC17.66■□□□□ 0.42
LRRC3Q9BY71 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC17.66■□□□□ 0.42
LRRC3Q9BY71 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
LRRC3Q9BY71 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC17.66■□□□□ 0.42
LRRC3Q9BY71 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LRRC3Q9BY71 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC17.66■□□□□ 0.42
LRRC3Q9BY71 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LRRC3Q9BY71 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
LRRC3Q9BY71 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
LRRC3Q9BY71 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LRRC3Q9BY71 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
LRRC3Q9BY71 HCG4-201ENST00000418983 998 ntBASIC17.66■□□□□ 0.42
LRRC3Q9BY71 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
LRRC3Q9BY71 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
LRRC3Q9BY71 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC17.66■□□□□ 0.42
LRRC3Q9BY71 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC17.66■□□□□ 0.42
LRRC3Q9BY71 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
LRRC3Q9BY71 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LRRC3Q9BY71 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
LRRC3Q9BY71 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
LRRC3Q9BY71 HTR7P1-202ENST00000624664 4411 ntBASIC17.66■□□□□ 0.42
LRRC3Q9BY71 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
LRRC3Q9BY71 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LRRC3Q9BY71 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LRRC3Q9BY71 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
LRRC3Q9BY71 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
LRRC3Q9BY71 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
LRRC3Q9BY71 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LRRC3Q9BY71 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LRRC3Q9BY71 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LRRC3Q9BY71 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC17.65■□□□□ 0.42
LRRC3Q9BY71 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
LRRC3Q9BY71 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
LRRC3Q9BY71 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
LRRC3Q9BY71 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
LRRC3Q9BY71 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
LRRC3Q9BY71 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
LRRC3Q9BY71 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
LRRC3Q9BY71 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
LRRC3Q9BY71 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC17.65■□□□□ 0.42
LRRC3Q9BY71 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LRRC3Q9BY71 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC17.65■□□□□ 0.42
LRRC3Q9BY71 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC17.65■□□□□ 0.42
LRRC3Q9BY71 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
LRRC3Q9BY71 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
LRRC3Q9BY71 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
LRRC3Q9BY71 AL512356.2-201ENST00000546955 174 ntBASIC17.65■□□□□ 0.42
LRRC3Q9BY71 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC17.65■□□□□ 0.42
LRRC3Q9BY71 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC17.65■□□□□ 0.42
LRRC3Q9BY71 AC091167.2-201ENST00000579581 588 ntBASIC17.65■□□□□ 0.42
LRRC3Q9BY71 AC005498.2-205ENST00000593218 784 ntBASIC17.65■□□□□ 0.42
LRRC3Q9BY71 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
LRRC3Q9BY71 AC084121.4-201ENST00000641598 221 ntBASIC17.65■□□□□ 0.42
LRRC3Q9BY71 AF228730.8-201ENST00000642140 221 ntBASIC17.65■□□□□ 0.42
LRRC3Q9BY71 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LRRC3Q9BY71 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
LRRC3Q9BY71 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
LRRC3Q9BY71 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC17.65■□□□□ 0.42
LRRC3Q9BY71 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LRRC3Q9BY71 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
LRRC3Q9BY71 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC17.65■□□□□ 0.42
LRRC3Q9BY71 AL138688.1-201ENST00000624851 1594 ntBASIC17.65■□□□□ 0.42
LRRC3Q9BY71 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC17.65■□□□□ 0.42
LRRC3Q9BY71 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
LRRC3Q9BY71 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LRRC3Q9BY71 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
LRRC3Q9BY71 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LRRC3Q9BY71 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LRRC3Q9BY71 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
LRRC3Q9BY71 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LRRC3Q9BY71 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
LRRC3Q9BY71 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
LRRC3Q9BY71 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
LRRC3Q9BY71 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC17.64■□□□□ 0.41
LRRC3Q9BY71 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
LRRC3Q9BY71 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC17.64■□□□□ 0.41
LRRC3Q9BY71 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
LRRC3Q9BY71 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
LRRC3Q9BY71 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
LRRC3Q9BY71 RNU1-129P-201ENST00000384064 167 ntBASIC17.64■□□□□ 0.41
LRRC3Q9BY71 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC17.64■□□□□ 0.41
LRRC3Q9BY71 HLA-DRB6-201ENST00000411500 1235 ntBASIC17.64■□□□□ 0.41
LRRC3Q9BY71 FAM8A3P-201ENST00000427218 844 ntBASIC17.64■□□□□ 0.41
LRRC3Q9BY71 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
LRRC3Q9BY71 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC17.64■□□□□ 0.41
LRRC3Q9BY71 U1.21-201ENST00000580816 167 ntBASIC17.64■□□□□ 0.41
LRRC3Q9BY71 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
LRRC3Q9BY71 AL390955.2-201ENST00000603032 514 ntBASIC17.64■□□□□ 0.41
LRRC3Q9BY71 Z92544.3-201ENST00000624747 417 ntBASIC17.64■□□□□ 0.41
LRRC3Q9BY71 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
LRRC3Q9BY71 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
LRRC3Q9BY71 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
LRRC3Q9BY71 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
LRRC3Q9BY71 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
LRRC3Q9BY71 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms