Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CDK5RAP1Q96SZ6 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CDK5RAP1Q96SZ6 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC17.59■□□□□ 0.41
CDK5RAP1Q96SZ6 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CDK5RAP1Q96SZ6 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC17.59■□□□□ 0.41
CDK5RAP1Q96SZ6 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CDK5RAP1Q96SZ6 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
CDK5RAP1Q96SZ6 AC131009.4-201ENST00000624048 1740 ntBASIC17.58■□□□□ 0.41
CDK5RAP1Q96SZ6 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CDK5RAP1Q96SZ6 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CDK5RAP1Q96SZ6 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
CDK5RAP1Q96SZ6 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CDK5RAP1Q96SZ6 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
CDK5RAP1Q96SZ6 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC17.58■□□□□ 0.41
CDK5RAP1Q96SZ6 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC17.58■□□□□ 0.41
CDK5RAP1Q96SZ6 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
CDK5RAP1Q96SZ6 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC17.58■□□□□ 0.41
CDK5RAP1Q96SZ6 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CDK5RAP1Q96SZ6 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC17.58■□□□□ 0.41
CDK5RAP1Q96SZ6 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CDK5RAP1Q96SZ6 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC17.58■□□□□ 0.41
CDK5RAP1Q96SZ6 PP12613-201ENST00000424958 2230 ntBASIC17.58■□□□□ 0.4
CDK5RAP1Q96SZ6 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC17.58■□□□□ 0.4
CDK5RAP1Q96SZ6 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
CDK5RAP1Q96SZ6 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CDK5RAP1Q96SZ6 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
CDK5RAP1Q96SZ6 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
CDK5RAP1Q96SZ6 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CDK5RAP1Q96SZ6 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
CDK5RAP1Q96SZ6 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CDK5RAP1Q96SZ6 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC17.58■□□□□ 0.4
CDK5RAP1Q96SZ6 ALG1L5P-201ENST00000482043 771 ntBASIC17.58■□□□□ 0.4
CDK5RAP1Q96SZ6 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC17.58■□□□□ 0.4
CDK5RAP1Q96SZ6 AP002490.2-201ENST00000524791 560 ntBASIC17.58■□□□□ 0.4
CDK5RAP1Q96SZ6 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
CDK5RAP1Q96SZ6 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
CDK5RAP1Q96SZ6 MIR3909-201ENST00000579518 119 ntBASIC17.58■□□□□ 0.4
CDK5RAP1Q96SZ6 MIR4469-201ENST00000583919 79 ntBASIC17.58■□□□□ 0.4
CDK5RAP1Q96SZ6 WT1-AS_2.1-201ENST00000613208 137 ntBASIC17.58■□□□□ 0.4
CDK5RAP1Q96SZ6 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC17.58■□□□□ 0.4
CDK5RAP1Q96SZ6 AL691403.2-201ENST00000618460 490 ntBASIC17.58■□□□□ 0.4
CDK5RAP1Q96SZ6 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CDK5RAP1Q96SZ6 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CDK5RAP1Q96SZ6 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC17.58■□□□□ 0.4
CDK5RAP1Q96SZ6 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
CDK5RAP1Q96SZ6 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CDK5RAP1Q96SZ6 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CDK5RAP1Q96SZ6 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC17.58■□□□□ 0.4
CDK5RAP1Q96SZ6 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CDK5RAP1Q96SZ6 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
CDK5RAP1Q96SZ6 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CDK5RAP1Q96SZ6 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CDK5RAP1Q96SZ6 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
CDK5RAP1Q96SZ6 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC17.58■□□□□ 0.4
CDK5RAP1Q96SZ6 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CDK5RAP1Q96SZ6 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
CDK5RAP1Q96SZ6 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC17.57■□□□□ 0.4
CDK5RAP1Q96SZ6 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC17.57■□□□□ 0.4
CDK5RAP1Q96SZ6 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC17.57■□□□□ 0.4
CDK5RAP1Q96SZ6 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC17.57■□□□□ 0.4
CDK5RAP1Q96SZ6 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
CDK5RAP1Q96SZ6 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
CDK5RAP1Q96SZ6 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CDK5RAP1Q96SZ6 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CDK5RAP1Q96SZ6 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC17.57■□□□□ 0.4
CDK5RAP1Q96SZ6 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
CDK5RAP1Q96SZ6 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CDK5RAP1Q96SZ6 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CDK5RAP1Q96SZ6 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC17.57■□□□□ 0.4
CDK5RAP1Q96SZ6 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CDK5RAP1Q96SZ6 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC17.57■□□□□ 0.4
CDK5RAP1Q96SZ6 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CDK5RAP1Q96SZ6 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CDK5RAP1Q96SZ6 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CDK5RAP1Q96SZ6 HMGA1P7-201ENST00000406908 502 ntBASIC17.57■□□□□ 0.4
CDK5RAP1Q96SZ6 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC17.57■□□□□ 0.4
CDK5RAP1Q96SZ6 STARD13-205ENST00000439831 945 ntTSL 2 BASIC17.57■□□□□ 0.4
CDK5RAP1Q96SZ6 AP006288.1-201ENST00000446065 395 ntBASIC17.57■□□□□ 0.4
CDK5RAP1Q96SZ6 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC17.57■□□□□ 0.4
CDK5RAP1Q96SZ6 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC17.57■□□□□ 0.4
CDK5RAP1Q96SZ6 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CDK5RAP1Q96SZ6 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
CDK5RAP1Q96SZ6 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CDK5RAP1Q96SZ6 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
CDK5RAP1Q96SZ6 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
CDK5RAP1Q96SZ6 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
CDK5RAP1Q96SZ6 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
CDK5RAP1Q96SZ6 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CDK5RAP1Q96SZ6 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC17.57■□□□□ 0.4
CDK5RAP1Q96SZ6 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CDK5RAP1Q96SZ6 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
CDK5RAP1Q96SZ6 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
CDK5RAP1Q96SZ6 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
CDK5RAP1Q96SZ6 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
CDK5RAP1Q96SZ6 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC17.57■□□□□ 0.4
CDK5RAP1Q96SZ6 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC17.56■□□□□ 0.4
CDK5RAP1Q96SZ6 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CDK5RAP1Q96SZ6 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC17.56■□□□□ 0.4
CDK5RAP1Q96SZ6 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CDK5RAP1Q96SZ6 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC17.56■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 64.8 ms