Protein–RNA interactions for Protein: Q96RK4

BBS4, Bardet-Biedl syndrome 4 protein, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4Q96RK4 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
BBS4Q96RK4 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
BBS4Q96RK4 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
BBS4Q96RK4 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
BBS4Q96RK4 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
BBS4Q96RK4 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
BBS4Q96RK4 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
BBS4Q96RK4 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
BBS4Q96RK4 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
BBS4Q96RK4 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
BBS4Q96RK4 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
BBS4Q96RK4 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
BBS4Q96RK4 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
BBS4Q96RK4 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC16.14■□□□□ 0.17
BBS4Q96RK4 SAPCD2P3-201ENST00000455031 850 ntBASIC16.14■□□□□ 0.17
BBS4Q96RK4 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
BBS4Q96RK4 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC16.14■□□□□ 0.17
BBS4Q96RK4 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
BBS4Q96RK4 IRF8-202ENST00000562492 946 ntTSL 3 BASIC16.14■□□□□ 0.17
BBS4Q96RK4 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC16.14■□□□□ 0.17
BBS4Q96RK4 AC064862.7-201ENST00000604520 867 ntBASIC16.14■□□□□ 0.17
BBS4Q96RK4 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
BBS4Q96RK4 REXO1L6P-202ENST00000619970 1078 ntBASIC16.14■□□□□ 0.17
BBS4Q96RK4 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
BBS4Q96RK4 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC16.14■□□□□ 0.17
BBS4Q96RK4 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
BBS4Q96RK4 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
BBS4Q96RK4 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
BBS4Q96RK4 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC16.14■□□□□ 0.17
BBS4Q96RK4 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC16.14■□□□□ 0.17
BBS4Q96RK4 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
BBS4Q96RK4 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC16.14■□□□□ 0.17
BBS4Q96RK4 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC16.14■□□□□ 0.17
BBS4Q96RK4 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
BBS4Q96RK4 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
BBS4Q96RK4 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
BBS4Q96RK4 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
BBS4Q96RK4 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC16.14■□□□□ 0.17
BBS4Q96RK4 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC16.14■□□□□ 0.17
BBS4Q96RK4 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
BBS4Q96RK4 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
BBS4Q96RK4 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
BBS4Q96RK4 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC16.13■□□□□ 0.17
BBS4Q96RK4 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
BBS4Q96RK4 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
BBS4Q96RK4 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC16.13■□□□□ 0.17
BBS4Q96RK4 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
BBS4Q96RK4 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC16.13■□□□□ 0.17
BBS4Q96RK4 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
BBS4Q96RK4 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
BBS4Q96RK4 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC16.13■□□□□ 0.17
BBS4Q96RK4 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
BBS4Q96RK4 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
BBS4Q96RK4 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
BBS4Q96RK4 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
BBS4Q96RK4 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
BBS4Q96RK4 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC16.13■□□□□ 0.17
BBS4Q96RK4 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
BBS4Q96RK4 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
BBS4Q96RK4 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
BBS4Q96RK4 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
BBS4Q96RK4 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC16.13■□□□□ 0.17
BBS4Q96RK4 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC16.13■□□□□ 0.17
BBS4Q96RK4 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC16.13■□□□□ 0.17
BBS4Q96RK4 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC16.13■□□□□ 0.17
BBS4Q96RK4 FGFR3P6-201ENST00000457012 610 ntBASIC16.13■□□□□ 0.17
BBS4Q96RK4 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC16.13■□□□□ 0.17
BBS4Q96RK4 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC16.13■□□□□ 0.17
BBS4Q96RK4 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC16.13■□□□□ 0.17
BBS4Q96RK4 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC16.13■□□□□ 0.17
BBS4Q96RK4 TBCB-205ENST00000585746 875 ntTSL 3 BASIC16.13■□□□□ 0.17
BBS4Q96RK4 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
BBS4Q96RK4 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
BBS4Q96RK4 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
BBS4Q96RK4 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC16.13■□□□□ 0.17
BBS4Q96RK4 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
BBS4Q96RK4 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
BBS4Q96RK4 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
BBS4Q96RK4 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
BBS4Q96RK4 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
BBS4Q96RK4 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
BBS4Q96RK4 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
BBS4Q96RK4 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
BBS4Q96RK4 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
BBS4Q96RK4 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
BBS4Q96RK4 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
BBS4Q96RK4 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
BBS4Q96RK4 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
BBS4Q96RK4 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
BBS4Q96RK4 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC16.12■□□□□ 0.17
BBS4Q96RK4 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
BBS4Q96RK4 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC16.12■□□□□ 0.17
BBS4Q96RK4 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
BBS4Q96RK4 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC16.12■□□□□ 0.17
BBS4Q96RK4 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
BBS4Q96RK4 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC16.12■□□□□ 0.17
BBS4Q96RK4 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
BBS4Q96RK4 AC011270.2-201ENST00000624293 2550 ntBASIC16.12■□□□□ 0.17
BBS4Q96RK4 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC16.12■□□□□ 0.17
BBS4Q96RK4 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms