Protein–RNA interactions for Protein: Q96M91

CFAP53, Cilia- and flagella-associated protein 53, humanhuman

Predictions only

Length 514 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP53Q96M91 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
CFAP53Q96M91 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
CFAP53Q96M91 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
CFAP53Q96M91 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC22.66■■□□□ 1.22
CFAP53Q96M91 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC22.66■■□□□ 1.22
CFAP53Q96M91 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC22.66■■□□□ 1.22
CFAP53Q96M91 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC22.66■■□□□ 1.22
CFAP53Q96M91 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC22.66■■□□□ 1.22
CFAP53Q96M91 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
CFAP53Q96M91 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
CFAP53Q96M91 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC22.66■■□□□ 1.22
CFAP53Q96M91 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
CFAP53Q96M91 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC22.66■■□□□ 1.22
CFAP53Q96M91 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC22.66■■□□□ 1.22
CFAP53Q96M91 RPL28-209ENST00000560055 670 ntTSL 3 BASIC22.66■■□□□ 1.22
CFAP53Q96M91 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
CFAP53Q96M91 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
CFAP53Q96M91 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
CFAP53Q96M91 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
CFAP53Q96M91 AC012569.1-201ENST00000591191 1524 ntBASIC22.66■■□□□ 1.22
CFAP53Q96M91 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
CFAP53Q96M91 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
CFAP53Q96M91 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC22.66■■□□□ 1.22
CFAP53Q96M91 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC22.65■■□□□ 1.22
CFAP53Q96M91 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC22.65■■□□□ 1.22
CFAP53Q96M91 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC22.65■■□□□ 1.22
CFAP53Q96M91 SLC22A20-204ENST00000530038 1673 ntBASIC22.65■■□□□ 1.22
CFAP53Q96M91 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC22.65■■□□□ 1.22
CFAP53Q96M91 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
CFAP53Q96M91 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC22.65■■□□□ 1.22
CFAP53Q96M91 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC22.65■■□□□ 1.22
CFAP53Q96M91 REM2-202ENST00000536884 1331 ntTSL 2 BASIC22.65■■□□□ 1.22
CFAP53Q96M91 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
CFAP53Q96M91 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
CFAP53Q96M91 FALEC-201ENST00000416894 566 ntTSL 3 BASIC22.65■■□□□ 1.22
CFAP53Q96M91 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC22.65■■□□□ 1.22
CFAP53Q96M91 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC22.65■■□□□ 1.22
CFAP53Q96M91 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC22.65■■□□□ 1.22
CFAP53Q96M91 HOTTIP_1.1-201ENST00000620415 57 ntBASIC22.65■■□□□ 1.22
CFAP53Q96M91 AP001350.2-201ENST00000625104 1094 ntBASIC22.65■■□□□ 1.22
CFAP53Q96M91 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC22.65■■□□□ 1.22
CFAP53Q96M91 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CFAP53Q96M91 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC22.65■■□□□ 1.22
CFAP53Q96M91 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
CFAP53Q96M91 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CFAP53Q96M91 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
CFAP53Q96M91 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
CFAP53Q96M91 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CFAP53Q96M91 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
CFAP53Q96M91 AC131009.4-201ENST00000624048 1740 ntBASIC22.65■■□□□ 1.22
CFAP53Q96M91 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC22.65■■□□□ 1.22
CFAP53Q96M91 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
CFAP53Q96M91 AC106820.2-201ENST00000563775 3264 ntBASIC22.65■■□□□ 1.22
CFAP53Q96M91 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CFAP53Q96M91 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC22.64■■□□□ 1.22
CFAP53Q96M91 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC22.64■■□□□ 1.22
CFAP53Q96M91 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
CFAP53Q96M91 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.22
CFAP53Q96M91 HARS-204ENST00000438307 1789 ntTSL 2 BASIC22.64■■□□□ 1.22
CFAP53Q96M91 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC22.64■■□□□ 1.21
CFAP53Q96M91 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
CFAP53Q96M91 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC22.64■■□□□ 1.21
CFAP53Q96M91 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC22.64■■□□□ 1.21
CFAP53Q96M91 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC22.64■■□□□ 1.21
CFAP53Q96M91 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC22.64■■□□□ 1.21
CFAP53Q96M91 AC087641.1-201ENST00000557561 1021 ntBASIC22.64■■□□□ 1.21
CFAP53Q96M91 AC068137.2-201ENST00000605408 478 ntBASIC22.64■■□□□ 1.21
CFAP53Q96M91 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC22.64■■□□□ 1.21
CFAP53Q96M91 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC22.64■■□□□ 1.21
CFAP53Q96M91 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
CFAP53Q96M91 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC22.64■■□□□ 1.21
CFAP53Q96M91 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
CFAP53Q96M91 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC22.64■■□□□ 1.21
CFAP53Q96M91 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
CFAP53Q96M91 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC22.63■■□□□ 1.21
CFAP53Q96M91 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC22.63■■□□□ 1.21
CFAP53Q96M91 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC22.63■■□□□ 1.21
CFAP53Q96M91 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC22.63■■□□□ 1.21
CFAP53Q96M91 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC22.63■■□□□ 1.21
CFAP53Q96M91 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC22.63■■□□□ 1.21
CFAP53Q96M91 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
CFAP53Q96M91 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC22.63■■□□□ 1.21
CFAP53Q96M91 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
CFAP53Q96M91 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
CFAP53Q96M91 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
CFAP53Q96M91 NMU-203ENST00000507338 658 ntTSL 3 BASIC22.63■■□□□ 1.21
CFAP53Q96M91 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
CFAP53Q96M91 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
CFAP53Q96M91 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC22.63■■□□□ 1.21
CFAP53Q96M91 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC22.63■■□□□ 1.21
CFAP53Q96M91 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
CFAP53Q96M91 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
CFAP53Q96M91 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
CFAP53Q96M91 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC22.63■■□□□ 1.21
CFAP53Q96M91 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
CFAP53Q96M91 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC22.62■■□□□ 1.21
CFAP53Q96M91 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC22.62■■□□□ 1.21
CFAP53Q96M91 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC22.62■■□□□ 1.21
CFAP53Q96M91 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
CFAP53Q96M91 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 59.4 ms