Protein–RNA interactions for Protein: Q96L96

ALPK3, Alpha-protein kinase 3, humanhuman

Predictions only

Length 1,907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALPK3Q96L96 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
ALPK3Q96L96 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC18.22■□□□□ 0.51
ALPK3Q96L96 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
ALPK3Q96L96 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
ALPK3Q96L96 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
ALPK3Q96L96 GOLGA2P9-201ENST00000596977 1937 ntBASIC18.21■□□□□ 0.51
ALPK3Q96L96 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
ALPK3Q96L96 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC18.21■□□□□ 0.51
ALPK3Q96L96 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC18.21■□□□□ 0.51
ALPK3Q96L96 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
ALPK3Q96L96 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC18.21■□□□□ 0.51
ALPK3Q96L96 AC005229.1-201ENST00000392885 409 ntBASIC18.21■□□□□ 0.51
ALPK3Q96L96 TPT1-AS1-203ENST00000412946 744 ntTSL 3 BASIC18.21■□□□□ 0.51
ALPK3Q96L96 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC18.21■□□□□ 0.51
ALPK3Q96L96 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC18.21■□□□□ 0.51
ALPK3Q96L96 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC18.21■□□□□ 0.51
ALPK3Q96L96 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC18.21■□□□□ 0.51
ALPK3Q96L96 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC18.21■□□□□ 0.51
ALPK3Q96L96 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
ALPK3Q96L96 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
ALPK3Q96L96 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
ALPK3Q96L96 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
ALPK3Q96L96 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC18.21■□□□□ 0.51
ALPK3Q96L96 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC18.21■□□□□ 0.51
ALPK3Q96L96 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC18.21■□□□□ 0.51
ALPK3Q96L96 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
ALPK3Q96L96 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
ALPK3Q96L96 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
ALPK3Q96L96 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
ALPK3Q96L96 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC18.21■□□□□ 0.51
ALPK3Q96L96 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
ALPK3Q96L96 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC18.21■□□□□ 0.51
ALPK3Q96L96 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC18.21■□□□□ 0.51
ALPK3Q96L96 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC18.21■□□□□ 0.51
ALPK3Q96L96 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
ALPK3Q96L96 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC18.21■□□□□ 0.51
ALPK3Q96L96 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
ALPK3Q96L96 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
ALPK3Q96L96 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC18.21■□□□□ 0.51
ALPK3Q96L96 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC18.21■□□□□ 0.51
ALPK3Q96L96 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC18.21■□□□□ 0.51
ALPK3Q96L96 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC18.21■□□□□ 0.51
ALPK3Q96L96 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC18.21■□□□□ 0.51
ALPK3Q96L96 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
ALPK3Q96L96 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC18.21■□□□□ 0.51
ALPK3Q96L96 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
ALPK3Q96L96 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
ALPK3Q96L96 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
ALPK3Q96L96 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC18.21■□□□□ 0.51
ALPK3Q96L96 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
ALPK3Q96L96 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC18.21■□□□□ 0.5
ALPK3Q96L96 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
ALPK3Q96L96 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC18.2■□□□□ 0.5
ALPK3Q96L96 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
ALPK3Q96L96 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
ALPK3Q96L96 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
ALPK3Q96L96 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC18.2■□□□□ 0.5
ALPK3Q96L96 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
ALPK3Q96L96 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC18.2■□□□□ 0.5
ALPK3Q96L96 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC18.2■□□□□ 0.5
ALPK3Q96L96 AC092337.1-201ENST00000568699 1129 ntBASIC18.2■□□□□ 0.5
ALPK3Q96L96 AC093726.1-201ENST00000608064 963 ntBASIC18.2■□□□□ 0.5
ALPK3Q96L96 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC18.2■□□□□ 0.5
ALPK3Q96L96 PPA1-206ENST00000625364 644 ntTSL 5 BASIC18.2■□□□□ 0.5
ALPK3Q96L96 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC18.2■□□□□ 0.5
ALPK3Q96L96 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
ALPK3Q96L96 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
ALPK3Q96L96 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
ALPK3Q96L96 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC18.2■□□□□ 0.5
ALPK3Q96L96 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC18.2■□□□□ 0.5
ALPK3Q96L96 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
ALPK3Q96L96 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
ALPK3Q96L96 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
ALPK3Q96L96 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
ALPK3Q96L96 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
ALPK3Q96L96 STX1A-203ENST00000395155 783 ntTSL 2 BASIC18.19■□□□□ 0.5
ALPK3Q96L96 BOLA2P3-201ENST00000404566 256 ntBASIC18.19■□□□□ 0.5
ALPK3Q96L96 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
ALPK3Q96L96 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC18.19■□□□□ 0.5
ALPK3Q96L96 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC18.19■□□□□ 0.5
ALPK3Q96L96 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC18.19■□□□□ 0.5
ALPK3Q96L96 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
ALPK3Q96L96 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
ALPK3Q96L96 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC18.19■□□□□ 0.5
ALPK3Q96L96 LINC01451-201ENST00000623792 534 ntBASIC18.19■□□□□ 0.5
ALPK3Q96L96 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
ALPK3Q96L96 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
ALPK3Q96L96 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC18.19■□□□□ 0.5
ALPK3Q96L96 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC18.19■□□□□ 0.5
ALPK3Q96L96 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC18.19■□□□□ 0.5
ALPK3Q96L96 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC18.19■□□□□ 0.5
ALPK3Q96L96 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
ALPK3Q96L96 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC18.19■□□□□ 0.5
ALPK3Q96L96 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC18.19■□□□□ 0.5
ALPK3Q96L96 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
ALPK3Q96L96 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
ALPK3Q96L96 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
ALPK3Q96L96 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC18.19■□□□□ 0.5
ALPK3Q96L96 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC18.19■□□□□ 0.5
ALPK3Q96L96 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms